| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0951 |
|---|
| Symbol | |
|---|
| ID | 8090093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1085603 |
|---|
| End bp | 1086430 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644835025 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002986580 |
|---|
| Protein GI | 242238399 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.24114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGACG TACTCAAAAA ACTGCTGCAT ACCCCGCAGG GCATCGCCGG GGTCAGCGTC
CTGCTGCTGG CGCTGCTTGT CGTTTGTGCC GGCGCTCATC TGGCGCCAGC CGACCCGGAG
GCGATCTCGA TTCTGGCGCG CTATAAGGCG CCCAACGCCG CGCACTGGTT CGGCACCGAT
CAGCTTGGGC GCGATATTTT CAGCCGGGTG CTGGTCGGCG CCCGCACCAC CATTCTTTAT
TCGCTGCTCG CCACCACGCT GGCGATGGTA GTCGGCTCGG TCATCGGCAC CGCCAGCGCC
TATCTGGGCG GCCGGATGGA CGAAGGCATC ATGCGCACCA TGGATGCCGT GATGTCGATC
CCCAGCCTGC TGTTCGCGCT GTTGATCGTC AGCACGCTGG GGCAAAGCAG CCTGAATGCG
GTGCTGGCCA TTACCATCGC CTTTGTGCCG GGCATGGTGC GCATCGCCCG CAGCGTGGCG
TTGGCCGTGC GCCAACAGGA TTACGTCAAT GCCGCCATCG CCCGCGGCGA ATCCGCCGGC
TATATCATCC TGCGGGAGAT GCTGCCCAAT ATCGTGGCGC CGATCATCGT GGAATCCACC
ATTCGCGTCT CCTTCGCCAT CATGCTGTTC GCCACCCTGA GCTTTCTGGG TCTGGGGGCG
CAACCGCCGC AGCCGGAATG GGGGCTGATG GTGTCCGAAG CCCGCGCCTA CTTCTTCAAC
GCACCCTGGA TGATGCTGAT CCCTGGGCTG GCGATCGCCA TCGTGGCGAT CGGTTTCAAC
CTGCTCGGCG ACGGGCTGCG CGACGTTCTG AATCCGAGGA GCCACTGA
|
|---|
| Protein sequence | MFDVLKKLLH TPQGIAGVSV LLLALLVVCA GAHLAPADPE AISILARYKA PNAAHWFGTD
QLGRDIFSRV LVGARTTILY SLLATTLAMV VGSVIGTASA YLGGRMDEGI MRTMDAVMSI
PSLLFALLIV STLGQSSLNA VLAITIAFVP GMVRIARSVA LAVRQQDYVN AAIARGESAG
YIILREMLPN IVAPIIVEST IRVSFAIMLF ATLSFLGLGA QPPQPEWGLM VSEARAYFFN
APWMMLIPGL AIAIVAIGFN LLGDGLRDVL NPRSH
|
|---|
| |