| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3865 |
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| Symbol | |
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| ID | 8134852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4348348 |
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| End bp | 4349271 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644867172 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003019416 |
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| Protein GI | 253690226 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTT CCTCTGAGCC GCCGGTCACT CGCGAATCGG TAATGCGGAC ACCGCCGGAA
AAACGCGCGA GCCGGCTACG GCTACGCGGT GCGCGGATCG CCGGGTTCCT GTTGATGATG
CTGCGCAATC CGCTGACTGC GATTGGTTCT GCGATTGTGC TGATGTTGAT GCTGGTCGCG
ATCTTCGCCC CGTGGATTGC GACACACGAT CCGTTGGCGC AGGACTTGGC CAACGCGTTA
CAGGCACCGA GTGCCGCACA CTATTTTGGC ACCGATGAGT TCGGGCGCGA TGTGTTTAGC
CGTCTGGTCT ATGGTTCACG CATCACGCTG TATATCGTTG CGCTGGTATC CGTCACCGTC
GGACCTATCG GGCTGCTACT GGGCGTGGTG GCGGGCTATT ATGGCGGGAT TGTCGATACC
ATCCTGATGC GTATCACCGA TATTTTCATC TCTTTCCCTA GTCTGGTGCT GGCACTGGCG
TTCGTTGCGG CGCTTGGCCC AGGGCTGGAA CATGTGGTGA TTGCAATTAC GCTGACGGCC
TGGCCGCCGA TTGCCCGTCT GGCAAGGGCG GAGACGCTGT CGCTGCGCCA CGCGGACTTT
GTTTCTGCCG TGAAGCTGCA AGGAGCCTCG TCTATCCGCA TCCTGCTGCA CCACATTGTA
CCGCTGTGTC TGCCGTCGGT GATTATCCGT ATCACTATGA ATATGGCCGG CATCATTCTG
ACCGCGGCAG GTCTGGGCTT TCTGGGGTTG GGTGCACAGC CGCCCGATCC TGAATGGGGC
GCGATGATCT CTGCGGGTCG TCGTTACATG ATGGAGTGCT GGTGGTTAGT AACTATTCCG
GGGCTGGCGA TTTTGATTAA CAGCCTGGCG TTCAACTTCC TTGGAGACGG CCTACGTGAC
ATCCTCGATC CCAGAACTGA ATAA
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| Protein sequence | MNISSEPPVT RESVMRTPPE KRASRLRLRG ARIAGFLLMM LRNPLTAIGS AIVLMLMLVA
IFAPWIATHD PLAQDLANAL QAPSAAHYFG TDEFGRDVFS RLVYGSRITL YIVALVSVTV
GPIGLLLGVV AGYYGGIVDT ILMRITDIFI SFPSLVLALA FVAALGPGLE HVVIAITLTA
WPPIARLARA ETLSLRHADF VSAVKLQGAS SIRILLHHIV PLCLPSVIIR ITMNMAGIIL
TAAGLGFLGL GAQPPDPEWG AMISAGRRYM MECWWLVTIP GLAILINSLA FNFLGDGLRD
ILDPRTE
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