| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1613 |
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| Symbol | |
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| ID | 3624238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1984612 |
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| End bp | 1985571 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637700494 |
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| Product | oligopeptide ABC transporter, permease protein |
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| Protein accession | YP_305139 |
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| Protein GI | 73669124 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAT CTGACGGTAC TGATATTCCC TGCATGAAAG AAACGAGCAT TGAGGGTTTT
TCTGAAAAAA AATCCGAAGC TTCCAACTTT GAATTTCCAA AAAAAACTTC TTTCTGGATT
TTTCAAAAAC GTAGAGGTTT TCAGGGACTA TTCAACTGGA TAGGCATTTT CCTCTTTGTA
CTTTTCATTT TTATGGCTCT TTTTCCTTCA ATTTTTGCTC CTTATGCCCC AGAAGAGCGT
TTCATACCCT ACGAAGCCCC TTCGGAAGAG CATCTGCTTG GGACAAATGA CATAGGAAAT
GATATCCTTT CAGAACTGGT GTTTGGGGCA AGGATCTCAA TGACAGTAGG TTTTATGGCA
GCCTTGATCT CAACTCTCAT CGGGACTGCG TTAGGTCTCT GTTCAGGCTA TTTCAGAGGA
ATCATTGATG AGCTGTTAAT GGGCTTTACT GATGTTGTCC TTGTCATCCC CAAGATCCCT
CTTATTATAG TCCTGGGAGC ATTTCTAAGG CCGAGCATCT GGATCCTGAT AGCCATATTG
GGGCTTCTTT CCTGGGAATC CACTGCCAGA GTCACACGCT CAAAGACTCT ACAGCTAAGG
GAAGCAGGTT ACGTAAAAAG TGCCCAATGT ATGGGTTTTT CCTCTTATCA CATTATGAAA
TCAGATATAT TCCCAAACAT TATCCATATC CTGTTCCCCA AATTTATGCT GGCAACTGCT
TCGGCAATGA TTTCTGAGGC ATCTCTTTCT TTCCTGGGAC TTGGTGACGT AAGCATGAAA
AGCTGGGGAA TGATGCTTTC TTTTGCTTTT TCTCAAGGTG GTTTTATTCG GGATATGTGG
TGGTGGTATA TGCCTCCAGG AATCTGTATC ACCCTCTGTG TACTCTCTAT CGCGCTGATA
GGTTTCGGGC TTGAAGCAAA GGAAACAGAA CACTTCAGAG AAGGTGCAAA CACATTATGA
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| Protein sequence | MNQSDGTDIP CMKETSIEGF SEKKSEASNF EFPKKTSFWI FQKRRGFQGL FNWIGIFLFV
LFIFMALFPS IFAPYAPEER FIPYEAPSEE HLLGTNDIGN DILSELVFGA RISMTVGFMA
ALISTLIGTA LGLCSGYFRG IIDELLMGFT DVVLVIPKIP LIIVLGAFLR PSIWILIAIL
GLLSWESTAR VTRSKTLQLR EAGYVKSAQC MGFSSYHIMK SDIFPNIIHI LFPKFMLATA
SAMISEASLS FLGLGDVSMK SWGMMLSFAF SQGGFIRDMW WWYMPPGICI TLCVLSIALI
GFGLEAKETE HFREGANTL
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