| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4129 |
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| Symbol | |
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| ID | 3936618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4238281 |
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| End bp | 4239219 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906515 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_512071 |
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| Protein GI | 89056620 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA CGACCCGGAC CCCAAGCGTT TCGGCGACCC AGTCCGTCGG CGGTATGGCC
AACAGCTACC GCCGCAAGGA GTTGCGTCGC GCGTTTCAAA GCATGATCAC CAGCCGATGG
GCGTTGATTG GGATGCTGAT CCTGCTGATC GTGACCTTCG TGGCCATCTT CGGGCCGTGG
CTCGCGCCCT TCGATCCCAA CCGGCAGAAC ATCATGATGC GCCTGTTGGA GCCCGGCCAG
CCCGGCGCCG GGGACCTCAC CTATTGGCTG GGATCTGACC AGTTGGGCCG TGATATCCTG
TCCCGCCTGC TCTATGGCGC GCGCGTTTCG CTGCTTGTGG GTGTCGCCGC CATTGTCGTG
GGCGGCGTGC TAGGGACAGT CGCAGGGTTG GTCGCGGGCT ATTTCGGCGG CTGGATTGAC
GATGTGATCA TGCGTCTGGG CGACATCCAG CTAGCGTTTC CGTTCATCCT CTTGGCGATC
ATGTTCTTGG TCGTGCTTGG GCCGGGGCTC GTGAATATCA TCCTCGTTCT CGGGATCGGG
CAGTGGATCA CTTACGCGCG CATCGTTCGG GCTCAGACGC TCTCCCTGCG CGAGAAGGAA
TATGTGGAGG CCGCCCGCGC CATGGGGGAC GGCACGTTCT CCATCCTGTT CCGCACGATC
CTGCCCAACA TCATCGCGCC GCTGACCGTC ATCGCCTCTT TCAACGTGGC AGGGGTCATC
CTGTCAGAAG CGGCGTTGTC GTTCCTTGGC CTTGGCGTGC CGCCCGACGT GCCCACCTGG
GGCTCCATGC TGTCGGAGAG TCGCGACCAT CTGTTGTCCA ATAAGTGGTG GATGGCAGTG
TTTCCCGGCC TCGCCATCGT TTTCACCGTG TTGGCCTTCA ATATCATCGG CGATTGGCTG
CGGGATTTCC TCGATCCGCG TTTGAAGGAA AATGGCTAG
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| Protein sequence | MADTTRTPSV SATQSVGGMA NSYRRKELRR AFQSMITSRW ALIGMLILLI VTFVAIFGPW
LAPFDPNRQN IMMRLLEPGQ PGAGDLTYWL GSDQLGRDIL SRLLYGARVS LLVGVAAIVV
GGVLGTVAGL VAGYFGGWID DVIMRLGDIQ LAFPFILLAI MFLVVLGPGL VNIILVLGIG
QWITYARIVR AQTLSLREKE YVEAARAMGD GTFSILFRTI LPNIIAPLTV IASFNVAGVI
LSEAALSFLG LGVPPDVPTW GSMLSESRDH LLSNKWWMAV FPGLAIVFTV LAFNIIGDWL
RDFLDPRLKE NG
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