More than 300 homologs were found in PanDaTox collection
for query gene Arth_0400 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_0400  binding-protein-dependent transport systems inner membrane component  100 
 
 
348 aa  684    Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2395  binding-protein-dependent transport systems inner membrane component  51.45 
 
 
334 aa  317  3e-85  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2075  binding-protein-dependent transport systems inner membrane component  51.27 
 
 
344 aa  312  3.9999999999999997e-84  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0173  binding-protein-dependent transport systems inner membrane component  47.02 
 
 
309 aa  244  9.999999999999999e-64  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.383419  n/a   
 
 
-
 
NC_013521  Sked_06410  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  46.49 
 
 
320 aa  241  2e-62  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.138967  normal 
 
 
-
 
NC_013172  Bfae_20160  ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component  47.92 
 
 
621 aa  234  1.0000000000000001e-60  Brachybacterium faecium DSM 4810  Bacteria  normal  0.533008  n/a   
 
 
-
 
NC_012669  Bcav_1400  ABC transporter related  43.34 
 
 
638 aa  233  4.0000000000000004e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.785888  normal  0.726008 
 
 
-
 
NC_010003  Pmob_0480  binding-protein-dependent transport systems inner membrane component  42.96 
 
 
274 aa  231  2e-59  Petrotoga mobilis SJ95  Bacteria  normal  0.534309  n/a   
 
 
-
 
NC_012669  Bcav_3402  binding-protein-dependent transport systems inner membrane component  45.96 
 
 
311 aa  228  1e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1898  binding-protein-dependent transport systems inner membrane component  37.38 
 
 
331 aa  222  7e-57  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6186  ABC transporter related  44.64 
 
 
590 aa  221  1.9999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2621  binding-protein-dependent transport systems inner membrane component  43.16 
 
 
320 aa  220  3e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_01330  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  41.18 
 
 
311 aa  217  2e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2578  ABC-type [(GlcNAc)2] transporter, permease protein  39.76 
 
 
341 aa  218  2e-55  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2515  binding-protein-dependent transport systems inner membrane component  38.41 
 
 
331 aa  216  4e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0878076  normal 
 
 
-
 
NC_013131  Caci_1180  binding-protein-dependent transport systems inner membrane component  38.85 
 
 
336 aa  214  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_1482  oligopeptide/dipeptide ABC transporter, ATPase subunit  38.55 
 
 
727 aa  213  4.9999999999999996e-54  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_0547  peptide ABC transporter, protein inner membrane binding component  40.78 
 
 
327 aa  206  4e-52  Psychromonas ingrahamii 37  Bacteria  normal  0.0218475  normal 
 
 
-
 
NC_012669  Bcav_0040  binding-protein-dependent transport systems inner membrane component  42.97 
 
 
320 aa  201  1.9999999999999998e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0147  peptide ABC transporter, permease protein  38.36 
 
 
341 aa  201  1.9999999999999998e-50  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1681  binding-protein-dependent transport systems inner membrane component  40.37 
 
 
358 aa  199  7.999999999999999e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.471831  n/a   
 
 
-
 
NC_009783  VIBHAR_03425  hypothetical protein  36.53 
 
 
341 aa  198  1.0000000000000001e-49  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_34910  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  37.41 
 
 
342 aa  198  1.0000000000000001e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5670  binding-protein-dependent transport systems inner membrane component  41.97 
 
 
300 aa  196  4.0000000000000005e-49  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2726  binding-protein-dependent transport systems inner membrane component  41.57 
 
 
303 aa  195  8.000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.576006 
 
 
-
 
NC_013456  VEA_002584  (GlcNAc)2 ABC transporter permease component 2  36.2 
 
 
341 aa  194  2e-48  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0929  binding-protein-dependent transport systems inner membrane component  38.8 
 
 
350 aa  193  4e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6686  binding-protein-dependent transport systems inner membrane component  43.96 
 
 
292 aa  191  2e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.340693  normal  0.469526 
 
 
-
 
NC_002936  DET1492  peptide ABC transporter, permease protein  35.48 
 
 
279 aa  187  3e-46  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1282  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
279 aa  187  3e-46  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1268  ABC-type dipeptide/oligopeptide/nickel transport systems, permease component  35.13 
 
 
279 aa  186  5e-46  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2743  binding-protein-dependent transport systems inner membrane component  41.67 
 
 
302 aa  186  6e-46  Ruegeria sp. TM1040  Bacteria  normal  0.418739  normal 
 
 
-
 
NC_011366  Rleg2_5782  binding-protein-dependent transport systems inner membrane component  44.81 
 
 
292 aa  185  8e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.10252 
 
 
-
 
NC_014210  Ndas_3655  binding-protein-dependent transport systems inner membrane component  36 
 
 
302 aa  182  1e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1597  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
282 aa  181  2e-44  Thermotoga sp. RQ2  Bacteria  normal  0.951442  n/a   
 
 
-
 
NC_009486  Tpet_1547  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
285 aa  180  2.9999999999999997e-44  Thermotoga petrophila RKU-1  Bacteria  normal  0.107676  n/a   
 
 
-
 
NC_013595  Sros_7458  peptide ABC transporter, permease protein  40.65 
 
 
281 aa  179  7e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.48372 
 
 
-
 
NC_009718  Fnod_1555  binding-protein-dependent transport systems inner membrane component  40 
 
 
280 aa  177  3e-43  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0590918  n/a   
 
 
-
 
NC_007333  Tfu_0912  ABC-type dipeptide/oligopeptide/nickel transport systems, permease components  37.85 
 
 
304 aa  176  8e-43  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013924  Nmag_3994  binding-protein-dependent transport systems inner membrane component  38.79 
 
 
325 aa  175  9e-43  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013131  Caci_5372  binding-protein-dependent transport systems inner membrane component  38.15 
 
 
279 aa  174  1.9999999999999998e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.194033 
 
 
-
 
NC_013159  Svir_19890  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  41.63 
 
 
289 aa  169  8e-41  Saccharomonospora viridis DSM 43017  Bacteria  hitchhiker  0.00186711  hitchhiker  0.000357505 
 
 
-
 
NC_013172  Bfae_21760  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  36.21 
 
 
310 aa  165  1.0000000000000001e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0612673  n/a   
 
 
-
 
NC_008553  Mthe_1035  binding-protein-dependent transport systems inner membrane component  35.97 
 
 
276 aa  165  1.0000000000000001e-39  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009621  Smed_5656  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
332 aa  163  5.0000000000000005e-39  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A1613  oligopeptide ABC transporter, permease protein  34.48 
 
 
319 aa  162  6e-39  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_2379  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
273 aa  162  8.000000000000001e-39  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.141415  normal 
 
 
-
 
NC_010003  Pmob_0490  binding-protein-dependent transport systems inner membrane component  36.16 
 
 
277 aa  161  2e-38  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1509  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
280 aa  160  3e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.284624  n/a   
 
 
-
 
NC_011661  Dtur_0216  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
280 aa  160  4e-38  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0346829  n/a   
 
 
-
 
NC_010718  Nther_2390  binding-protein-dependent transport systems inner membrane component  36.76 
 
 
306 aa  160  4e-38  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7183  ABC transporter membrane spanning protein (oligopeptide)  36.43 
 
 
335 aa  158  1e-37  Agrobacterium vitis S4  Bacteria  normal  0.587678  n/a   
 
 
-
 
NC_010581  Bind_2549  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
344 aa  158  1e-37  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_1436  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
314 aa  157  3e-37  Natrialba magadii ATCC 43099  Archaea  normal  0.289557  n/a   
 
 
-
 
NC_010718  Nther_2198  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
290 aa  155  7e-37  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00106936  normal 
 
 
-
 
NC_014210  Ndas_0633  binding-protein-dependent transport systems inner membrane component  40.25 
 
 
340 aa  155  7e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.705479 
 
 
-
 
NC_013526  Tter_2747  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
288 aa  154  2e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0747  binding-protein-dependent transport systems inner membrane component  36.95 
 
 
279 aa  154  2.9999999999999998e-36  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0916  binding-protein-dependent transport systems inner membrane component  36.56 
 
 
280 aa  153  4e-36  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0894  binding-protein-dependent transport systems inner membrane component  36.56 
 
 
280 aa  153  4e-36  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2970  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
281 aa  152  5.9999999999999996e-36  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0153047  normal  0.258787 
 
 
-
 
NC_013739  Cwoe_2947  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
300 aa  152  8e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.456335  normal  0.0430362 
 
 
-
 
NC_013595  Sros_7446  ABC transporter, permease  34.09 
 
 
299 aa  151  1e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.913354  normal 
 
 
-
 
NC_008786  Veis_4252  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
276 aa  151  1e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.176316  normal  0.343929 
 
 
-
 
NC_013926  Aboo_0843  binding-protein-dependent transport systems inner membrane component  42.79 
 
 
818 aa  151  2e-35  Aciduliprofundum boonei T469  Archaea  unclonable  0.000000000335755  n/a   
 
 
-
 
NC_009485  BBta_7556  putative dipeptide ABC transporter (permease protein)  34.64 
 
 
279 aa  151  2e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3464  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
293 aa  150  4e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.141846  n/a   
 
 
-
 
NC_007643  Rru_A2012  binding-protein dependent transport system inner membrane protein  35.77 
 
 
276 aa  150  4e-35  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13060  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
485 aa  149  5e-35  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2084  ABC transporter, permease  35.54 
 
 
293 aa  149  6e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.395639  normal  0.741475 
 
 
-
 
NC_007778  RPB_3080  binding-protein dependent transport system inner membrane protein  33.58 
 
 
283 aa  149  1.0000000000000001e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.35224  normal 
 
 
-
 
NC_007778  RPB_3131  binding-protein dependent transport system inner membrane protein  32.48 
 
 
279 aa  148  1.0000000000000001e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.19818 
 
 
-
 
NC_013743  Htur_1412  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
306 aa  149  1.0000000000000001e-34  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007925  RPC_3488  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
279 aa  147  2.0000000000000003e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5669  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
302 aa  147  3e-34  Delftia acidovorans SPH-1  Bacteria  normal  0.330271  normal  0.031338 
 
 
-
 
NC_007498  Pcar_1867  ABC-type transport system protein  35.03 
 
 
288 aa  147  4.0000000000000006e-34  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0928  oligopeptide ABC transporter, permease protein  35.63 
 
 
274 aa  146  5e-34  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.00180433  normal 
 
 
-
 
NC_007948  Bpro_4403  binding-protein-dependent transport systems inner membrane component  32 
 
 
311 aa  146  5e-34  Polaromonas sp. JS666  Bacteria  normal  normal  0.292723 
 
 
-
 
NC_007802  Jann_4129  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
312 aa  146  6e-34  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_17740  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  33.46 
 
 
331 aa  145  7.0000000000000006e-34  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00436739  n/a   
 
 
-
 
NC_012918  GM21_1592  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
280 aa  145  1e-33  Geobacter sp. M21  Bacteria  n/a    normal  0.961775 
 
 
-
 
NC_007778  RPB_0130  binding-protein dependent transport system inner membrane protein  31.29 
 
 
306 aa  145  1e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2573  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
279 aa  145  1e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.786779  n/a   
 
 
-
 
NC_014150  Bmur_0314  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
468 aa  144  3e-33  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0424  binding-protein-dependent transport systems inner membrane component  34.57 
 
 
281 aa  143  5e-33  Polaromonas sp. JS666  Bacteria  normal  0.170759  normal 
 
 
-
 
NC_010718  Nther_2796  binding-protein-dependent transport systems inner membrane component  31.32 
 
 
299 aa  143  6e-33  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0669  binding-protein-dependent transport systems inner membrane component  36.03 
 
 
280 aa  142  6e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.489038  normal 
 
 
-
 
NC_002967  TDE1074  oligopeptide/dipeptide ABC transporter, permease protein  33.48 
 
 
464 aa  142  7e-33  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2745  binding-protein-dependent transport systems inner membrane component  32.66 
 
 
313 aa  142  7e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_4862  putative ABC transporter, permease protein  36.47 
 
 
327 aa  142  9e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.400673  normal  0.659782 
 
 
-
 
NC_010505  Mrad2831_3219  binding-protein-dependent transport systems inner membrane component  34.4 
 
 
279 aa  141  9.999999999999999e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.511198  normal 
 
 
-
 
NC_012880  Dd703_0144  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
298 aa  140  1.9999999999999998e-32  Dickeya dadantii Ech703  Bacteria  normal  0.0407535  n/a   
 
 
-
 
NC_008942  Mlab_0043  hypothetical protein  35.1 
 
 
269 aa  141  1.9999999999999998e-32  Methanocorpusculum labreanum Z  Archaea  normal  0.728589  normal  0.420247 
 
 
-
 
NC_012791  Vapar_5233  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
283 aa  141  1.9999999999999998e-32  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011371  Rleg2_6557  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
277 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.116936  normal  0.325454 
 
 
-
 
NC_009674  Bcer98_0187  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
334 aa  140  3e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2013  binding-protein-dependent transport systems inner membrane component  34.44 
 
 
285 aa  140  3e-32  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010525  Tneu_1420  binding-protein-dependent transport systems inner membrane component  38.12 
 
 
471 aa  140  3.9999999999999997e-32  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.0657441  normal 
 
 
-
 
NC_013530  Xcel_0264  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
299 aa  140  3.9999999999999997e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.502248  n/a   
 
 
-
 
NC_008261  CPF_2553  oligopeptide/dipeptide ABC transporter, permease protein  31.14 
 
 
304 aa  140  3.9999999999999997e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
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