Gene Nther_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2390 
Symbol 
ID6314277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2554189 
End bp2555109 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content42% 
IMG OID642644778 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001918543 
Protein GI188586998 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG AAATTGAATC TCAATTACAG GAACATGATG CTCCTAGTTT TAAAAGTAAA 
GTATCTTCAT TGGCCTATTT CATTAAAGAA ATTTTCAGTC AGGACAAAAT GGCCTTGATC
GGGACCATTA TTTTTATCCT GTTTATCATA GTCGCCCTCA TGGCTCCAAC TCTAGCACCC
CATGACCCTA TGGAAATACA TCGCAGAGAT GGGGAGATTG TACGGACTGA ACCCCCATCT
AGCGAATTTC CCTTTGGGAC AACTAATAGG GGACGCTGTG TCTTTAGCCA GGTGATTATG
GGAAGCAGAG TTGCCCTATT GGTAGGCGCC CTGGCAGCTC TACTAGTAAC TATAATTGGC
TCAAATATAG GATTGATTTC AGGTTATTAT GGTGGTTGGA TAGATAATCT ATTCATGAGA
ATCGTCGACA TCAGTTATGC CATACCTTTT ATCCCTTTTA CAATAATCCT GGTCACATTA
TTAAGACCTA GTATTTGGAA TATAATTTTA GCCATTGTGG TCCTTACATG GAGGACAATA
GCCAGGGTTT TAAGGGCTCA AGTGTTGTCA GTAAAAGAAC GTCCCTATGT GAAAGCGGCT
AAAGTAGCTG GTGCAAGCAA TGCCAGGATA ATTTTCCTAT ATATTCTTCC TAATGTCCTT
CCTCTGGCTT TGCTGGAAAT GTCACTAAGA ATGGCTCAAG CCATTGTTGC AGAATCAACG
GTAAGCTTTT TGGGTTTCGG AGACCCGGAT GTAATTAGCT GGGGTAGAAT TTTACAGGAA
GGCTTTATCG CTGGAGCTAT GCGGGAAGCT TGGTGGTGGG TAATTCCACC AGGATTAGCT
ATTGCCATAG TAGTAGTATC GGTATTCTTT AGTTCCAGAG CCCTGGAATT TGTAGCTAAT
CCTCAATTAA GGAGGCGATA G
 
Protein sequence
MNKEIESQLQ EHDAPSFKSK VSSLAYFIKE IFSQDKMALI GTIIFILFII VALMAPTLAP 
HDPMEIHRRD GEIVRTEPPS SEFPFGTTNR GRCVFSQVIM GSRVALLVGA LAALLVTIIG
SNIGLISGYY GGWIDNLFMR IVDISYAIPF IPFTIILVTL LRPSIWNIIL AIVVLTWRTI
ARVLRAQVLS VKERPYVKAA KVAGASNARI IFLYILPNVL PLALLEMSLR MAQAIVAEST
VSFLGFGDPD VISWGRILQE GFIAGAMREA WWWVIPPGLA IAIVVVSVFF SSRALEFVAN
PQLRRR