Gene Rleg_6686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6686 
Symbol 
ID8022596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp117689 
End bp118567 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content63% 
IMG OID644833553 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002984687 
Protein GI241666603 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.340693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.469526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCC TGCTTCGAAA CCGCAAGGCG CTGATCGGTC TCGTCATCAT CGCTTTCATC 
GTCCTCGTCG CGATCGCAGC GCCCCTGCTG ACGCAGTACG ATCCCGCCGC CCGCACCGGG
CGGCCGCACC AGCCGCCATC GCTCGACCAC ATCCTCGGCA CCACCCGCAT CGGCCAGGAT
GTCTTTGCCC GACTGATCTA CGGCGCCCGC ACTTCGCTTG CCGTCGGCTT CGGCGCCGGC
CTGCTGATCA CGCTCGTCGG GACCGCACTC GGCATCATCT CCGGCTATCG CGGCGGCAAG
ACCGACGAGA TCATCAGCTT CTTCACCAAT ATGGTGCTGG TCGTTCCGAA CCTACCGCTG
CTGCTCGTGC TCGCCGCTTT CATCGGCCAG GCAAGCCCCC TCGTCATCGC CCTCATCCTC
GGCGCCACCT CCTGGGCATG GGGTGCACGC GTCACCCGCG CCGAAACGCT CTCCGTCAAG
CAGAAGGATT TCGTCAAATC CGCCGAGATG ATGGGCGAGC CGCAATGGCG CATCATGACA
TTCGAGATCT TTCCCAACGT GATTTCAATC GTCGGCATCA ATTTCATCGG CAGCGTCATC
TTCGCGATCA TCACCGAGGC GACGCTCGAG TTCCTCGGCC TCGGCGATCC GAGAGCGATC
TCCTGGGGCA CGATGCTCTA CAATGCGCAG AAGGCTTCGG CTCTTTCGGT CGGCGCCTGG
TGGGATATTC TCACCCCCTG CTTCGCGCTC GCCTTTCTCG GCATCGGCAT GTCATTGCTG
AACTTCGCCG TCGACGAGAT CGCCAATCCG CGGCTGCGCA CCGGCAATCA TCTGAAGCGC
TGGTCCCTGC TCGTTCGAAC AGGGGAGGGC CGCCTGTGA
 
Protein sequence
MKTLLRNRKA LIGLVIIAFI VLVAIAAPLL TQYDPAARTG RPHQPPSLDH ILGTTRIGQD 
VFARLIYGAR TSLAVGFGAG LLITLVGTAL GIISGYRGGK TDEIISFFTN MVLVVPNLPL
LLVLAAFIGQ ASPLVIALIL GATSWAWGAR VTRAETLSVK QKDFVKSAEM MGEPQWRIMT
FEIFPNVISI VGINFIGSVI FAIITEATLE FLGLGDPRAI SWGTMLYNAQ KASALSVGAW
WDILTPCFAL AFLGIGMSLL NFAVDEIANP RLRTGNHLKR WSLLVRTGEG RL