Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6686 |
Symbol | |
ID | 8022596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | + |
Start bp | 117689 |
End bp | 118567 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644833553 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002984687 |
Protein GI | 241666603 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.340693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.469526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCC TGCTTCGAAA CCGCAAGGCG CTGATCGGTC TCGTCATCAT CGCTTTCATC GTCCTCGTCG CGATCGCAGC GCCCCTGCTG ACGCAGTACG ATCCCGCCGC CCGCACCGGG CGGCCGCACC AGCCGCCATC GCTCGACCAC ATCCTCGGCA CCACCCGCAT CGGCCAGGAT GTCTTTGCCC GACTGATCTA CGGCGCCCGC ACTTCGCTTG CCGTCGGCTT CGGCGCCGGC CTGCTGATCA CGCTCGTCGG GACCGCACTC GGCATCATCT CCGGCTATCG CGGCGGCAAG ACCGACGAGA TCATCAGCTT CTTCACCAAT ATGGTGCTGG TCGTTCCGAA CCTACCGCTG CTGCTCGTGC TCGCCGCTTT CATCGGCCAG GCAAGCCCCC TCGTCATCGC CCTCATCCTC GGCGCCACCT CCTGGGCATG GGGTGCACGC GTCACCCGCG CCGAAACGCT CTCCGTCAAG CAGAAGGATT TCGTCAAATC CGCCGAGATG ATGGGCGAGC CGCAATGGCG CATCATGACA TTCGAGATCT TTCCCAACGT GATTTCAATC GTCGGCATCA ATTTCATCGG CAGCGTCATC TTCGCGATCA TCACCGAGGC GACGCTCGAG TTCCTCGGCC TCGGCGATCC GAGAGCGATC TCCTGGGGCA CGATGCTCTA CAATGCGCAG AAGGCTTCGG CTCTTTCGGT CGGCGCCTGG TGGGATATTC TCACCCCCTG CTTCGCGCTC GCCTTTCTCG GCATCGGCAT GTCATTGCTG AACTTCGCCG TCGACGAGAT CGCCAATCCG CGGCTGCGCA CCGGCAATCA TCTGAAGCGC TGGTCCCTGC TCGTTCGAAC AGGGGAGGGC CGCCTGTGA
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Protein sequence | MKTLLRNRKA LIGLVIIAFI VLVAIAAPLL TQYDPAARTG RPHQPPSLDH ILGTTRIGQD VFARLIYGAR TSLAVGFGAG LLITLVGTAL GIISGYRGGK TDEIISFFTN MVLVVPNLPL LLVLAAFIGQ ASPLVIALIL GATSWAWGAR VTRAETLSVK QKDFVKSAEM MGEPQWRIMT FEIFPNVISI VGINFIGSVI FAIITEATLE FLGLGDPRAI SWGTMLYNAQ KASALSVGAW WDILTPCFAL AFLGIGMSLL NFAVDEIANP RLRTGNHLKR WSLLVRTGEG RL
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