Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_13060 |
Symbol | |
ID | 7313627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1400787 |
End bp | 1402244 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643611746 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002509051 |
Protein GI | 220932143 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATG GAAATATTCC AGTAAAACCT GGTAAAGGAC CAGATGTCAA GTCTTCAGGC TGGAGTGATT TTAAGTCTTC CCTGGGAGAA TTCTGGCAGG AATTTAGCAG GGTAAAATAT GGTAAATGGG GATTAGTTTT ACTGGCTATT TTTATCCTTA TGATTATTTT TAGCTCCCAG ATTACACCTT TTAAAGAAGC GGGTACCAGA TGGAGTGATA TAGAATACTG GGAAGATAAT CCCCAGAGTG CAGCCCCGGC CTGGATTAAC TGGTTTTCAT CACAGAAGAG AACTGAACAT GAAATTTTAA GGGATCCGGA GTGGAAGGTT ATTGACAGAG GTAGAATGAA AACCTATAGT GGGTCATTTA CCTATAATTA CCAGTATGAT ATTCCACCTG ATGAACTAAT ATTTAAGGCC CTGAGTAAAG GGACAGTAAA TATGCAGGTC ACCCTGGTCA GGCCCGATGG TGAGGAAATA AGAATGACCC AGGCCAGTGT TAATTCCAGA AAAGAACAGA AGGTCAGGGC TCCTATGGCC AATGATGCCA TGTTTGGAGC ATACCGGCTT GCATCTAGGT TTGAGAGCCG TGAAAATTTA GAGAAAATAA ATAAAAATTC TATCAACCCG ATTAAAGTTA TTTTTTCAAG AGGTCAGGAG GGAATTTTAA TAAATCCCAG TCCCTTAAAG GGTGAATATA AGGTTAAGAT TGAAGGAGTA GCTATTGGTA AAGATTCATA TATAAAGGAA CCTTCTCTGA TAGTTGCTGG AAAGGTGTAT GGAATTCTGG GTACCGATAA CGCCAAGCGG GATATCTGGA GTGGTATCGT AGTTGGAACT AAATGGGCAA TGTTAATCGG GTTAATGACC TCATTTATAT CGGTATCCGT AGGAGTTATT TATGGTGTTA CCAGTGCTTA TTTTGGTGGC TGGGTGGATT CGGCAATGAT GAGGGTCTTT GAGGTTTTTG TCAGTATACC GATGCTTCCG GTTCTAATTG TAGTCAGTGC TATTTTTAAA CCCAGTATCT GGTTAATTAT TTTAATGATG TGTATCTTCT ACTGGACGGG ACCGGTTAGA ACAGTAAGGA GTATGGGTCT GCAAATAAAA GAAGAAACTT ACATTGAAGC GGCAAAGGCC CTTAATGCTT CTAATTCCAG AATTATATTT AAACATATGA TTCCCCAGCT AATTCCTTAT GCTTTTGCTT CGATGGCCCT TTCAGTTCCA GGTGCTATTG TTGTTGAAGC CAGTTTGAGT TTGCTCGGGG TAGGCGATAC GACAATAGTT ACCTGGGGCC AGATACTCCA CGGTGCCCAT GTTAATGGGG CAGTTCTACA GGGCTTATGG TGGTGGGTAA TACCACCAGG ATTGGCAATT GCCCTGATGG GTATGACTTT TGCCTTTATT GGATTTTCTA TGGATAAAAT TCTAAATCCC AAATTGAAGA CGAGGTAG
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Protein sequence | MSNGNIPVKP GKGPDVKSSG WSDFKSSLGE FWQEFSRVKY GKWGLVLLAI FILMIIFSSQ ITPFKEAGTR WSDIEYWEDN PQSAAPAWIN WFSSQKRTEH EILRDPEWKV IDRGRMKTYS GSFTYNYQYD IPPDELIFKA LSKGTVNMQV TLVRPDGEEI RMTQASVNSR KEQKVRAPMA NDAMFGAYRL ASRFESRENL EKINKNSINP IKVIFSRGQE GILINPSPLK GEYKVKIEGV AIGKDSYIKE PSLIVAGKVY GILGTDNAKR DIWSGIVVGT KWAMLIGLMT SFISVSVGVI YGVTSAYFGG WVDSAMMRVF EVFVSIPMLP VLIVVSAIFK PSIWLIILMM CIFYWTGPVR TVRSMGLQIK EETYIEAAKA LNASNSRIIF KHMIPQLIPY AFASMALSVP GAIVVEASLS LLGVGDTTIV TWGQILHGAH VNGAVLQGLW WWVIPPGLAI ALMGMTFAFI GFSMDKILNP KLKTR
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