Gene Bfae_17740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_17740 
Symbol 
ID8400320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand- 
Start bp1989087 
End bp1990082 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content70% 
IMG OID644997837 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_003155184 
Protein GI257068929 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00436739 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCC CGAACGCACC CGTCACGGAC GAGAAGGCCG CTCCGCGCAG CAATCCGTTC 
CGCTCCTTCA ACTTCTCCAG CAGGTTCTGG ATCGCGCTGG TCCTCGTGGC CGGGATCGTG 
CTCCTCGGCC TCGCCGGGCT GGTGTACCCC ACCAGCTCCT CGGAGAAGGT GGGCTCGCTG 
TACGACGCCC CGGGCGACGG CCTGCTCCTG GGCACGGACA ACTTCGGCCA CGACGTCGTC 
GCCGTGCTGA TGGCCGGTAC CCGCACCTCG CTCATCATCG GCCTGGTCGC CGGGATCGTC 
GCCACCACCA TCGGCGTGCT CATCGGCCTG CTCTCCGGCT ATGTGGGCGG CTGGTTCGAG 
GAGCTGCTCA TGGGCATCAC GAACGTGGTG CTCGCGATCC CCTCGATCAT CGTGCTGATC 
CTCATCTCGA TCTCGCTGCC GCAGAGCAGC ATCTGGTCGC TCGCGATCGT CATCGGCATC 
ACCTCCTGGC CGTGGACGGC ACGCGCCGTG CGCGCCCAGG CCTCCTCGGT CGCCACCCGC 
GAGCACATCG ACGTGGCCCG GCTCTCCGGG GCGCGGCTGC CCGCGATCCT GCTCAAGGAC 
GTGCTGCCGT ACATCCTGTC CTACACCGTG ATGGCCTTCG TGCTGCAGGT GGCCGGGGCG 
ATCCTCGCGG AGGCGGCGCT GTCCATGCTG GGCCTGGGCC CCTCGGGCGC CGACTCCCTG 
GGCACCCAGC TCCACTGGGC GCTGGCCTTC CAGGCCGTCG CGAGCGGTGC CTGGTGGGCG 
TTCCTGCCGC CGACGATCGT GCTCACCCTG GTCTCCTTCG GCTTCCTGCT GCTGCAGGCC 
AGCCTCGACG AGGTGTTCAA CCCGCGCCTC CGGCGCGGCA AGCGCAAACA GATGAAACAG 
GCCGCGGCAC GCCGGGCCGA GGAGGCGCGG CTGCTGGCCG AGCAGCCCTT CCCGGCCGAC 
GCCCCCGAAC CCACGAGAGC AGGTGAGCAC GCATGA
 
Protein sequence
MSTPNAPVTD EKAAPRSNPF RSFNFSSRFW IALVLVAGIV LLGLAGLVYP TSSSEKVGSL 
YDAPGDGLLL GTDNFGHDVV AVLMAGTRTS LIIGLVAGIV ATTIGVLIGL LSGYVGGWFE 
ELLMGITNVV LAIPSIIVLI LISISLPQSS IWSLAIVIGI TSWPWTARAV RAQASSVATR 
EHIDVARLSG ARLPAILLKD VLPYILSYTV MAFVLQVAGA ILAEAALSML GLGPSGADSL 
GTQLHWALAF QAVASGAWWA FLPPTIVLTL VSFGFLLLQA SLDEVFNPRL RRGKRKQMKQ 
AAARRAEEAR LLAEQPFPAD APEPTRAGEH A