Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4520 |
Symbol | |
ID | 8335874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5147877 |
End bp | 5148782 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957622 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003115224 |
Protein GI | 256393660 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.20807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.604183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGA CAGTCAACCT CGCCCCGGCC GGCCTCAAGC CCCGCACGCG CCACCCGGCG TGGGCGGCCT TCCGCCGGGC GGTGACCCGC AAGCCGGGCC GCCTGGCCGG CCTGATCATC ATTGTGTTCT TCATCCTGCT GGCGATCTGC GGGCCCTGGT TCTACGGCTC GCTGTCCGTC GACCCGAACG AGCTGTACGC GCCGCCCAGC GCCAAGCACT GGCTGGGCAC CGACTTCGCC GGCTCCGACG TGCTGCAGGA GGTGGTGACC GGCGCGCGCT ACGTGCTGGC CACCGCCGCG CTGTCGGCAC TGTTCACCAG CCTGTTCGGC GTCACGGTCG GACTGGTCGC CGGCTACCAG CGCGGCATGA CCGACAGCGT CCTGATGCGT CTGACGGACT TCGTCCTGAC GATCCCGGGC CTGCCGCTGC TGATCATCCT GTCCACGGTG TGGAGCTTCG GCAGCCCGTG GGAGATGGGC CTGGTGCTGG GCATCACCGG CTGGGGCGGG GTCGCCCGGG CCGTGCGCTC GCAGGCGCTG TCGCTGCGCG AGCGCGGGTT CCTGGAAGCG GCGCGCGGTC TGGGGCTGTC CCGGCGGCAC ATCATCGTCA AGGAGATGCT GCCGAACATC GCCCCCTACG CCGCCATGCA GCTGATGCTG TCGGTGATCG GCTTCATCGG CGCCGAGGTC GGCCTGTTCT TCCTGGGGCT GGTGCCGTTC TCCAGCACCA ACTGGGGTGT GATGCTGAAC CAGGCGGTGT TCTCCGGCGG GGCGATGGAG ACCTCCTCGG CGCTGATCTA CCTGCTGGCG CCGCTGGTCT GCATCCTGCT GCTGACGCTG GGCATCGTGC TCTTCCTGGA CGCCATCGAC GAACTGTTCA ACCCGCGGCT GAGGGAGCGC GTGTGA
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Protein sequence | MTATVNLAPA GLKPRTRHPA WAAFRRAVTR KPGRLAGLII IVFFILLAIC GPWFYGSLSV DPNELYAPPS AKHWLGTDFA GSDVLQEVVT GARYVLATAA LSALFTSLFG VTVGLVAGYQ RGMTDSVLMR LTDFVLTIPG LPLLIILSTV WSFGSPWEMG LVLGITGWGG VARAVRSQAL SLRERGFLEA ARGLGLSRRH IIVKEMLPNI APYAAMQLML SVIGFIGAEV GLFFLGLVPF SSTNWGVMLN QAVFSGGAME TSSALIYLLA PLVCILLLTL GIVLFLDAID ELFNPRLRER V
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