| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0621 |
|---|
| Symbol | |
|---|
| ID | 5875964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | - |
|---|
| Start bp | 644391 |
|---|
| End bp | 645323 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641540967 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001662265 |
|---|
| Protein GI | 167039280 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0465132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGA ACAGTGCGGG AGAACTTTCT CAGGAACTTT TTACTCATGT AGGCAAAAAT
ATAAGTGAAA TGGAGGCTAT AGCAAGGCCA AGCATTACCT ACTGGCAGGA TGCATGGAGA
AGGTTAAAGC AAAATAAAGC AGCAATGCTG GGATTAATAA TAATTATACT TTATACTTTT
CTGGCAATAG TTGGACCTTA TATGACTCCA TACGACTATA GAACTACAAA CCCCTCTGAG
ATTAACCAGC CGCCTTCAGC CAGGCACTGG TTTGGAACAG ATTCCTTAGG AAGAGATTTG
TGGACACGCA CATGGATGGG CGCAAGGGTA TCCTTAATGA TTGGTTTTGT GGCAGCGCTT
TTGAACGCGG TAATAGGTGT TCTAGTGGGG GGAATCTCGG GTTATTTTGG TGGTAAAGTT
GATATGATCA TAATGAGGTT TGTTGATATT ATGTATGCTA TTCCATATAT GATAATTGTT
ATATTGATGA TGGTTGTCCT CGGGCAGGGT ATTATGCCGT TGATTCTGGC ACTGGTTATT
GGCGGATGGG TTGGTATGGC AAGGCTTGTC CGCGGGCAGA TTCTTCAGTT AAAAGAACAA
GAATTTGTAC TGGCAGCAAA AGTACTCGGA GCAAGTCATT CAAGAATAAT TTGGAAGCAC
TTGATACCAA ATGCGATGGG CGTAATTTTG GTAAACCTTA CTATGTCTGT TCCGAGTGCT
ATATTCACTG AAGCCTTTTT AAGCTTTATA GGTCTTGGTG TAGTTCCTCC GCATTCAAGC
TGGGGTCAGC TGGCATCTTA CGGTGCCCAA TCTTTTAGAG TATATCCCTA CCAGCTTTTC
ATACCGGCAT TCTTTATAAG TACAACAATG CTTTCCCTTA ACCTCCTCGG CGATGGATTA
AGGGATGCAC TGGATCCAAG ACTTCGCAGT TAA
|
|---|
| Protein sequence | MMQNSAGELS QELFTHVGKN ISEMEAIARP SITYWQDAWR RLKQNKAAML GLIIIILYTF
LAIVGPYMTP YDYRTTNPSE INQPPSARHW FGTDSLGRDL WTRTWMGARV SLMIGFVAAL
LNAVIGVLVG GISGYFGGKV DMIIMRFVDI MYAIPYMIIV ILMMVVLGQG IMPLILALVI
GGWVGMARLV RGQILQLKEQ EFVLAAKVLG ASHSRIIWKH LIPNAMGVIL VNLTMSVPSA
IFTEAFLSFI GLGVVPPHSS WGQLASYGAQ SFRVYPYQLF IPAFFISTTM LSLNLLGDGL
RDALDPRLRS
|
|---|
| |