Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1282 |
Symbol | |
ID | 5131664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1254551 |
End bp | 1255390 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640530216 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001214739 |
Protein GI | 147669921 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATCC TTAAAAAACT GACCGCAAAT AAACTCCTGT TCTTCGGGGT GGTACTTCTG GGGATATTCG TGCTTTCAGC GGTATTTGCT CCGCTGATTT CCCCGCATGA CCCGTGGACT TACGGACAGG CTTTTCTGCA CCCTTCTGCC CAGCATCTGC TGGGGACTAA TGACGTGGGG CAGGATATAT TTTCCGAGCT GGTTTATTCT GCCAGAGTAT CCCTGTGGGT GGGTTTTGTA TCTGCCTCTC TGGCTACTTT GCTGGGGGTG GCGGTGGGTA TCTGGGCAGG ATTCCGCCGC GGCTGGCTGG ATAATGTACT GATGGGTATG GCTGATATAT TTCTGGTTAT ACCGGCTCTG CCTCTGGTAA TACTCCTTTC GGTATATCTG GGACCCAGTA TCTGGAATAT TATTCTGGTT ATCGCCCTGA CTCTCTGGCC GGGGACGGCA CGGGTAATCC GTTCGCAGGT GATTACTATC CGCCAGAGCG GTTACGTGGA ATCCGCCCGT ATTATGGGGG CAAGTGAATT CCGCCTGATG TGGCGGCATG TACTTCCGAA TGTATTGCCA CTGGTGGCTG CAAAGTTTAT TCTGGCGGTG GCGGTGGCCT TGCTCCTTGA GGCTTCCATG AGTTTTCTGG GTCTGGGTGA CCCGTCTCAA AAAAGCTGGG GCATGATGCT TCATTATGCT TTTTCACGGG GAGGATTTGT CCAGAACCTG TACTGGTGGT ATCTGCCGCC GGGACTGTGC ATTACCCTGT GCATACTGGG GCTGACCTTT ATCAATATGA GTTTTGAAGA CCGTACTGAT CCCCGGTTGC AAAGGATACT GGACAGATGA
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Protein sequence | MNILKKLTAN KLLFFGVVLL GIFVLSAVFA PLISPHDPWT YGQAFLHPSA QHLLGTNDVG QDIFSELVYS ARVSLWVGFV SASLATLLGV AVGIWAGFRR GWLDNVLMGM ADIFLVIPAL PLVILLSVYL GPSIWNIILV IALTLWPGTA RVIRSQVITI RQSGYVESAR IMGASEFRLM WRHVLPNVLP LVAAKFILAV AVALLLEASM SFLGLGDPSQ KSWGMMLHYA FSRGGFVQNL YWWYLPPGLC ITLCILGLTF INMSFEDRTD PRLQRILDR
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