Gene VIBHAR_03425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03425 
Symbol 
ID5553624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3468466 
End bp3469491 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content48% 
IMG OID640908905 
Producthypothetical protein 
Protein accessionYP_001446597 
Protein GI156975690 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAC TATTTAAACT GATTTTAGGT AACGCGTTCG CACGTGTTGG TTTGGCAATT 
ATCTCAGTAT TCATCTTTGT GGCAGTAGCT GCACCTTTGA TTACTCAACA CGCACCAGAC 
AAACGTACTG GTAACCCACA CGAATACCCG GGCTTTGTTG TAAAACAAGC ACAAAACAAC 
CCTGATGGCT GGGTTGCGAA AAACCTAGCA GATGATCGTC GTACGCTGCT TATGTCGAAA 
AAGGCAGACC ACGTTCTAGG TACATCTCGC ATGGGTCGTG ACATCTGGTC TCAAGTTGCT 
TACGGCGCTC GAGTATCGCT GGGTGTTGGT TTCGGCGCGG GTATCATCGT GTGTTTCTTA 
GCAACAGTTA TTGGTATCTC AGCAGGTTAC TTCGGCGGCC GTGTCGATGA CGTACTGAGT 
GCTGCAATGA ACATCATGCT GGTTATCCCA CAGTTACCAC TACTGTTCGT ACTCGCTGCA 
TTTATCGGGG AGGCAGGACC GCTCACCATT GCGTTGATTA TCGCCGGGAC CTCCTGGGCT 
TGGGGTGCAC GTGTTGTGCG AGCTCAAACC ATGGCACTAC GAGAAAAAGA ATTTGTTAAA 
GCCGCAGAGG TTCTTGGCGA ATCATCCATA CGTATCATCT TCGTTGAGAT TTTACCAAAC 
CTTATCCCAA TCGTAGGCGC AAGCTTCATC GGTTCGGTAA TGCTAGCAAT CAACACAGAA 
GCGGTAATTT CGTTCCTAGG TTTAGGCGAT GCAAACACTA TCAGCTGGGG CATCATGCTG 
TACAACGTAC AGACTTCATC AGCGATGCTT ATCGGCGCTT GGTGGGAAGT ACTAGCTCCT 
TGTATTGCAC TGACTCTACT GGTGACTGGC CTTGCTCTAC TGAACTTCGC AGTCGATGAA 
ATTGCCAACC CGCAGCTTCG TTCTCACAAA GGTATGAAGC GCTGGAAGAA AATGGCAGCA 
CAAGACAAGA AAGAACGTGA GCCAGAATTG GCACCACAAA ATGCACTATG GAGCGGAGAT 
AAATAA
 
Protein sequence
MKELFKLILG NAFARVGLAI ISVFIFVAVA APLITQHAPD KRTGNPHEYP GFVVKQAQNN 
PDGWVAKNLA DDRRTLLMSK KADHVLGTSR MGRDIWSQVA YGARVSLGVG FGAGIIVCFL 
ATVIGISAGY FGGRVDDVLS AAMNIMLVIP QLPLLFVLAA FIGEAGPLTI ALIIAGTSWA 
WGARVVRAQT MALREKEFVK AAEVLGESSI RIIFVEILPN LIPIVGASFI GSVMLAINTE 
AVISFLGLGD ANTISWGIML YNVQTSSAML IGAWWEVLAP CIALTLLVTG LALLNFAVDE 
IANPQLRSHK GMKRWKKMAA QDKKEREPEL APQNALWSGD K