Gene Snas_2621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2621 
Symbol 
ID8883816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2753685 
End bp2754647 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content69% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003511392 
Protein GI291300114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CCACCGTCAC CGCCCCCGGC GACGCCGAAC GGCGGGCCGC CAACCGGTTG 
CTGTTCTTCC GCAACCGCAA GACCCTCATC GGGCTGGGCA TCCTCGGCTT CTTCGTCGTG
ATGGCGATCG TCGGCGAATG GATCGCGCCC TACGACCCGT CCAAGACCTC ACCGGACGTA
CTGCAACCGC CGTCGGCGCA GCACTGGCTG GGCACCACCA ACACCGGACA GGACATCGCC
TCGCAGCTGC TGGTCGGCAC CCGGGGCGTC CTGCTCGTGG GACTGCTGGC GGGGCTGGCG
GCCACGGTGC TGTCGGTGAT CGTCGGCGTC ACCGCCGGGT TCCTGGGCGG CGTCGGCGAC
GAGATCCTCT CCCTGGTGGC CAACATCTTC CTGGTGATCC CGGCGCTGCC GCTGATCATC
ATCGTGGCCG GGCTGCTGCC CGAGGCGGGC GGCATCACCG TCGCGGTGGT GATCTCGCTG
ACCGGCTGGG CCTGGGGTTC GCGGGTGCTG CGCGCCCAGA CGCTGTCGCT GCGGCGCCGC
GACTTCGTCG AGGCCGCCCG CGCCAACGGC GAATCCATGT GGCGGCTGGT GATCTTCGAG
ATCCTGCCGA ACCTGACCGC CGTCATCGCC GCCGGTTTCG TCGGCACCGT GATCTTCGCG
ATCCTGTCCG AGATCGCGCT GGCCTTCATC GGCGTCACCA GCATCTCGGA ATGGAACTGG
GGCACGATCC TGTTCTGGGC GCAGAGCAAC CAAGCGCTCG CCCAGGGCGC CTGGTGGTGG
TTCGTACCCG CCGGCCTGTG CATCGCGGGC GTCGGCACCG CCCTGACCCT CATCAACTTC
GGTATCGACG AATTCGTCAA CCCCCGGCTG CGCACCACCG GCCGGGACGC CAAACTGTTG
CGCGCCAAAC GTATCCGCGC CAGGGTCGGT TTCACCCCGG TACTGAGGCA GGAGAAACGA
TGA
 
Protein sequence
MTTPTVTAPG DAERRAANRL LFFRNRKTLI GLGILGFFVV MAIVGEWIAP YDPSKTSPDV 
LQPPSAQHWL GTTNTGQDIA SQLLVGTRGV LLVGLLAGLA ATVLSVIVGV TAGFLGGVGD
EILSLVANIF LVIPALPLII IVAGLLPEAG GITVAVVISL TGWAWGSRVL RAQTLSLRRR
DFVEAARANG ESMWRLVIFE ILPNLTAVIA AGFVGTVIFA ILSEIALAFI GVTSISEWNW
GTILFWAQSN QALAQGAWWW FVPAGLCIAG VGTALTLINF GIDEFVNPRL RTTGRDAKLL
RAKRIRARVG FTPVLRQEKR