| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1180 |
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| Symbol | |
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| ID | 8332515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1329715 |
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| End bp | 1330725 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954327 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003111946 |
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| Protein GI | 256390382 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC TGACATCAGC GGACTCCGCG ACCCCGCAGG CTCCGGCCGG TGCGCCGGCT
CCGGGCCGGC GGCGCGGACG CGGCGCCGTG TGGCGCTCGT TCCTGACCAA CCGCAAGGCC
AACGTCGGCT TCGGCATGTT CTTCGTGCTC CTGGTGATGG CGGTCTTCCC CTCGCTGTTC
ACCTCGGTGT CCGACCCGAC CGCCCCGGCC CGGTTCACGC CGCGCCTGAC GCCGTCGGGG
GCGCACTGGT TCGGCACCAC CTCGCTGGGC CAGGACATCT GGGCGCTGTT CGTCTACGGC
GCCCGCGAGC CCTTGATCAT CGCGGTCGTG GCCGGCGGAC TGGCGACCGT CATCTCGGTG
CTGGTCGGCG TCTCCGCGGC CTACCTCGGC GGGATCCCGG ACAACGTGCT GTCCTTCATC
ACCAACGTGG TGCTGGTCAT CCCGACCTTC CCGCTGGTGA TCGTGCTGTC CGCGTACGCC
GGCAAGCCGA CCCTGACCAT CATGGTCGCG GTGCTGGTGG TCACCGGCTG GTCCTACGGC
GCGAACCAGA TGCGCGCCCA GGCGCTGTCG CTGCGCAACC GCGACTTCCT GGAGTCGTCG
CGGGTCCGCG GCGAGCGCCG GTCCTACATC ATCGTCTTCG AGATGCTGCC GACGATGATC
TCGCTGATCA TCGCCAACTT CCTCGGCGCC GCCCTGTACT CCGTGCTCGC TGCGGCAGGC
CTGCAGTTCC TGGGTCTGGG CGACCCGAAC TCCGACAGCT GGGGCACCAT GCTCTACTGG
GCCGACTCGC AGTCCGCGCT GGAGTCGGGC ACCGCGTGGT GGGCCGTGCT GCCGGCCATC
GGCATCGCCG TGCTCGGCGT CGCCTTCGCC CTGATGAACT ACGCCTTCGA CGAGATCAGC
AACCCGGCCC TGCGGCCCGT GAGGAGGCAG CGCGGCAAGC TCGGCGTGCG CCGCCGTCCC
GGCTCCGCGC GGACCGCCGC GGTCGCCGGC GGAGGTGCCG GAAATGAGTG A
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| Protein sequence | MTTLTSADSA TPQAPAGAPA PGRRRGRGAV WRSFLTNRKA NVGFGMFFVL LVMAVFPSLF
TSVSDPTAPA RFTPRLTPSG AHWFGTTSLG QDIWALFVYG AREPLIIAVV AGGLATVISV
LVGVSAAYLG GIPDNVLSFI TNVVLVIPTF PLVIVLSAYA GKPTLTIMVA VLVVTGWSYG
ANQMRAQALS LRNRDFLESS RVRGERRSYI IVFEMLPTMI SLIIANFLGA ALYSVLAAAG
LQFLGLGDPN SDSWGTMLYW ADSQSALESG TAWWAVLPAI GIAVLGVAFA LMNYAFDEIS
NPALRPVRRQ RGKLGVRRRP GSARTAAVAG GGAGNE
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