| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3402 |
|---|
| Symbol | |
|---|
| ID | 7859175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3801821 |
|---|
| End bp | 3802756 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643867501 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002883406 |
|---|
| Protein GI | 229821880 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA ACCTCACGAC CGAGGTCCAG CCGCCGCCAC CGGAGGACGA GGCGCGCGTC
GACGTCGCGT TCGCCGACGC GGGCCGGCAC TCGTGGGTCC CCGGCTGGGC CGTCATCCTC
TGGCGGAACA AGAAGTGCCG CGTCGGGCTC CTCATGGTGC TCGCGTTCTG CCTGGTCGCG
CTGTTCGCTC CCGTGATCGC GCCGTACGGG CCGCGGGAGG CGACCGGCGA CATCAGCGCC
GACCCGAGCG GCACGTACTG GCTGGGCACG ACGAACCGCG GTGAGGACAT CTTCAGCCAG
CTCGTCTACG GCGCCCGGAC GTCGCTCCTC GTCGGCATCG TCGCGGGGGC GATCTCCACG
GTGATCTCGC TCGCCGTCGG CCTCACCGCC GGGTACCGGC AGGGGCTCGT CGACGAGGTG
CTGAGCTTCG CGACCAACCT GGCGCTCGTC GTCCCCGTGC TGCCGCTCAT CGTCATGCTC
GCCGCGTACT CACCGGTCCG CGGGCTGTGG CTCATCATCG GGGTCATCTC GATCACCGGC
TGGGCGTACG GCGCCCGGAT CAAGCGGTCC CAGGTCATCA CCCTGCGCAC CCGGGACTAC
GTGACGGCGG CCCGGCTCGC CGGCGACTCG ACGGCGCGGA TCATCTGGCG GGAGATCCTG
CCGAACATGA CGTCGCTCGT CGTCGTCGGG TTCATGGGTG CGGCCCTCGG CGCGATCGGC
GGCGAGGCGG GGCTGGCGTT CCTCGGGCTC GGCGACCCGC GCACGACCAG CTGGGGCACG
ATGCTCAACC AGGCGAACGT GGGCGGCGCG CTCATCACCG GCCAGTGGGC GTGGCTCGGC
GCGCCGGGGC TCGCGCTGGC GCTGCTCATC TGCAGCTTCA CGCTCATCAA CTTCGGCGTC
GACGCGCTGA GCAACCCGCA CCTGAGGGAG GACTGA
|
|---|
| Protein sequence | MTANLTTEVQ PPPPEDEARV DVAFADAGRH SWVPGWAVIL WRNKKCRVGL LMVLAFCLVA
LFAPVIAPYG PREATGDISA DPSGTYWLGT TNRGEDIFSQ LVYGARTSLL VGIVAGAIST
VISLAVGLTA GYRQGLVDEV LSFATNLALV VPVLPLIVML AAYSPVRGLW LIIGVISITG
WAYGARIKRS QVITLRTRDY VTAARLAGDS TARIIWREIL PNMTSLVVVG FMGAALGAIG
GEAGLAFLGL GDPRTTSWGT MLNQANVGGA LITGQWAWLG APGLALALLI CSFTLINFGV
DALSNPHLRE D
|
|---|
| |