| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2743 |
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| Symbol | |
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| ID | 4077615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2887867 |
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| End bp | 2888775 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008068 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_614737 |
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| Protein GI | 99082583 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.418739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATC TCCTTCGTAC CTTTCTGCGC AATCGCAAGG CCGCTATCGG GCTCACCATC
GTGCTGATCT ATGTGGCGAT TGCGATTGCC GCGCCCCTGA TCGCACCGTT TGATCCCATT
GCCCGCGTGG GCCGTCCGCA TCAGCCGCCC TCGGTCGAAC ACTGGCTCGG GACCACCCGC
ATGGGGCGCG ACGTGTTCAG CCAGTTGGTC TGGGGCACGC GTACCTCGCT GATGGTGGGG
ATTGTTGCCG GCCTGATCGT GACCGCGATT GGCACCTTCA TCGGCATCAC CGCTGCCTAT
TTTGGCGGCC TTGTGGATGA TATCCTCAAC TTCTTTACCA ATGTGGTTCT GGTGCTGCCA
CAACTGCCGC TCCTGCTGGT TCTGGCCGCT TTCCTCGGTC AGGTCGGACC CTGGGCGATC
GCGCTTATTA TCGGTCTGAC CTCCTGGGCC TGGGGCGCAC GCGTCACCCG TGCACAGGCG
ATGTCGCTCA AGACCCGCGA CTTTATTCAG GCCTCCGCGA TGATCGGAGA GCCTACGTGG
CGGATGATCC TTGTCGAGAT GCTGCCGAAC CTGCTGTCGA TCATAGGGTT CAACTTTATC
GGCTCCGTCA TTTTCACCAT CATCACCGAG GCCACGCTTG AATTCCTCGG CCTTGGCAGC
CCCTTGGCCC TGTCGTGGGG CACCATGCTT TATAATGCGC AGACCGCTTC GGCGATCATG
GTTGGCGCAT GGTGGGAGGT TCTGGCCCCT TGTGCGGCGA TCGTGCTGAT CGGTGTCGGC
CTGTCGCTGA TGAACTTCGG CGTGGACGAG ATCGCAAACC CCCGGATGCG CACCCTTGGC
AATGTCGCCA AGGCGCTGCG GATCGAAAAG CGCTTGCTGC GCCAACGCAT GCAGGAGGCC
GAGCAATGA
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| Protein sequence | MSDLLRTFLR NRKAAIGLTI VLIYVAIAIA APLIAPFDPI ARVGRPHQPP SVEHWLGTTR
MGRDVFSQLV WGTRTSLMVG IVAGLIVTAI GTFIGITAAY FGGLVDDILN FFTNVVLVLP
QLPLLLVLAA FLGQVGPWAI ALIIGLTSWA WGARVTRAQA MSLKTRDFIQ ASAMIGEPTW
RMILVEMLPN LLSIIGFNFI GSVIFTIITE ATLEFLGLGS PLALSWGTML YNAQTASAIM
VGAWWEVLAP CAAIVLIGVG LSLMNFGVDE IANPRMRTLG NVAKALRIEK RLLRQRMQEA
EQ
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