Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0040 |
Symbol | |
ID | 7858243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 42614 |
End bp | 43576 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643864118 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002880068 |
Protein GI | 229818542 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGATCG CCACCCAGGA CCCGGAGCTC GCCGCCGCCG AGGCGGCCGC GCTCCCGCGC AAGAAGGCGC GCATCCTTCC GCCGATGACG CCGAAGCTCG CCGTCGGCCT CGTCATCGCC GGCCTCATCA CGATCTTCGG GCTCGTCGGG CCGTGGTTCG TGGGCGACCC GTCCACCGTC AACGACGTCG GCCTCGCGCC GCCGTCGTCG GAGTTCTGGC TCGGGACGAC GCAGACGGGC CAGGACGTGT TCGCCCAGCT CGCCTACGCC ACCCGCGGTT CCCTGATCAT CGGCGTGATC GTGGGAGCCC TGACGCTTGT GATGTCGGCG TTCTTCGGCG TGGTCGGAGC GTTCGCCGGC GGCTGGACGG ACGAGGCCTT CTCCCTCGTC ACCAACGTGA TGCTCGTGAT CCCCGGCCTG CCGCTCGTCA TCGTCATCTC GAGCTACGTG AGCGAGAAGA GCGTGCTGCT CGTCGCCGTC GTCCTCGCAC TGACCAGCTG GGCCGGGTCG GCTCGCGTGC TGCGCGGCTT CACGCTCAGC GTGCGGAACC GGGACTACGT GCTCGCCGCC CGCGTCAGCG GCGAACCGTC CTGGCGCATC CTCGCCGTCG AGATCCTGCC CAACCTCATC CCGCTGCTCG CCTCCCAGGT GGTGTTCGCC GTCATCTTCG GGATCCTCGG CGAGGCCGGG CTGTCGTTCC TGGGGCTCGG CGCCACCGGG TCGTTCACGT GGGGGACGAT GCTGTACTAC GCGCAGAACG GCCTCGCGCT CCGCCTCGGC GCCTGGTGGT GGTTCGTGCC ACCGGGCCTC CTGCTCGCCG TGTTCGGCGC GGCCCTGTCG CTCATCAACT TCTCGATCGA CACGATCATC AACCCGAAGC TCCGGGACTC GACACGTGAG GTCCGCAAGG GGTGGCGCAT GACGCGGCAG CAGCTGCGCA AGGCCGAGGA GGAGGTCGTA TGA
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Protein sequence | MSIATQDPEL AAAEAAALPR KKARILPPMT PKLAVGLVIA GLITIFGLVG PWFVGDPSTV NDVGLAPPSS EFWLGTTQTG QDVFAQLAYA TRGSLIIGVI VGALTLVMSA FFGVVGAFAG GWTDEAFSLV TNVMLVIPGL PLVIVISSYV SEKSVLLVAV VLALTSWAGS ARVLRGFTLS VRNRDYVLAA RVSGEPSWRI LAVEILPNLI PLLASQVVFA VIFGILGEAG LSFLGLGATG SFTWGTMLYY AQNGLALRLG AWWWFVPPGL LLAVFGAALS LINFSIDTII NPKLRDSTRE VRKGWRMTRQ QLRKAEEEVV
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