| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1482 |
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| Symbol | |
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| ID | 8543864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2011890 |
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| End bp | 2014073 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646386193 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003265928 |
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| Protein GI | 262194719 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACA CCAGCTCGCC CTCGAGCCTC GACCAGGCCG CGCTCGAGGG CGCCGACGAC
GAAGCCGTGA CCGCCCGCGC TCGCCCCAGG TCGCGCGTCC CCTTCGCCGG CAATCGCAAG
GCCACGCTCG GCCTCGTCAT CCTCGGCGTG TACCTGCTGC TCGCCATCGT CGGCCCGTGG
CTCGCGCCCT TCGACCCCGA CGCGCGCAGC GCCGACCTGC TCATGCCGCC CTCGAGCACG
CACTGGCTGG GCACCACCCA TCTCGGCCAG GACCTGCTCA GCCAGCTCCT CGTCGGCACC
CGCGGCGTCA TGGTCGTCGG CCTCAGCGCC GGCATCCTGG CCACCATTCT GTCGGTGCTC
ATCGGCGTGA GCGCCGGCTA TCTCGGCGGC GTCTGGGACG ACGTGCTGTC GGCGCTGTCG
AACGTGTTCC TGGTGATTCC CGCGCTGCCG CTGATCATCA TCGTGGCCTC GACCTTCGTC
AGCGCCGGCG CCGTCATCGT CGCCGCGACC ATCGGTTTTA CCTCGTGGGC CTGGGGCGCG
CGCGTGCTGC GCGCACAGAC CCTGTCGCTG CGCCGACGCG ACTACATCGA GGCGGCTCGC
GCCTCGGGCG AGAGCACCTG GCGCATCGTG CTGTTCGAGA TCCTGCCCAA CCTCACCGCC
ATCATCGCCT CGAGCTTCGT CGGCACCGTG ATCTTCGCGG TCACCACCGA GATCACCCTG
GCCTTCATCG GCATCGGCGG CATCTCCGAC TGGAACTGGG GCGAAATCCT ATTCTGGGCG
CAGAGCCAGC AGGCCCTGGC CCAGGGCGCG TGGTGGTGGT TCGTGCCCGC CGGCCTGGCC
ATCGCCTTCC TCGGCACCGC GCTGGCGCTG CTCAATTTCG GTATCGACGA GTTCGTCAGC
CCGCGCCTGC GCAGCGCTGG CAAGAGCAAA GTCAAAACCG CCGACGGCCG CACCGTGCGC
ATGCGCGTGG GCTTCACGCC GGTACTCGAC AGCGCGGCCG CAGCGGCGAA CGCGGCGCCG
AGCGCGCACT CGCTGCGCAC CGCGGCCGGC AGCGGCCCGA CGCACACACC GCCGTCGAAC
CAACCCCCGT CGAGCAAACA ACCGGTGCTC GAGATCCGCC ACTTGCACGT CGATTACGGC
CTGGGCGACG AGGCCGTGCA CGCGGTGCGC GACGTCCAGC TCACCCTGCA CCGCGGCGAA
GTGCTCGGCC TGGCCGGCGA GAGCGGCTCG GGCAAATCCA CCCTGGCCTA CGGCCTCACC
CGGCTGCTGG CCCCGCCCGG CGCCGTCGCC AGCGGCGAAG TCATCTACCA CCCGGCGCAG
GGTGCGCCCT ACGACGTGCT CAAGCTCTCG GACAGCGAGC TGCGCAAGTT CCGCTGGGCC
GAGACCGCCA TCGTCTTCCA GGGCGCGATG AACTCGCTCA ACCCGGTGCA CAAGGTCGCC
ACCCAGCTCC ACGACGTGCT GCGCGCGCAC GAGCCCGAGC TCTCGCCCGA GAGCCGCGAC
GCCCGCTGCC GCGAGATGCT CAAGCTGGTC GGCATCTCGG CCGACCGCAT GGACGCCTAT
CCCCACCAGC TCTCGGGCGG CATGCGCCAG CGCGTGATGA TCGCCATGGC CCTGATCCTG
CGCCCGCAGG TGGTCATCAT GGACGAGCCG ACCACGGCGC TCGACGTGGT CATGCAGCGC
CAGATCCTCG GACAGTTGGT CGAGTTGCGC GAGCGGCTCG GCTTCTCGGT CATCTTCATC
ACCCACGACC TGTCGCTGCT CGTCGAGTTC TCCGACCGCA TCGCCATCAT GTACGGCGGC
CAGATCGTCG AGGAGGCGCC GGCCGCCACG CTGTACCGCG ACTCGCTGCA TCCCTACAGC
GCCGGCCTGC TGTCCTCGTT CCCGGCCCTG CGCGGCCCGC GCCGCGAGCT CTCGGGCATT
CCCGGCTCGC CGCCGGACCT CAAGGGCATG CCCGGCGGCT GCTCGTTCCA CCCGCGCTGC
TCGCGCGCGT TCGGCCCCTG CCGCACCGAC ACCCCGGTGC TCGGCCAACC CGACACCGCC
GACGGCGCCA GCCGCAGCGT CGCCTGCTGG CTGCACCCGG CCGCCGGCTC GGTCGATGCG
GACACCGCGA GCGGCGCTCC CATCCCCGGC GAGCTCGTCC CCCTGCGCCT CTCCCATCCC
TCTTCATCCC CAGGAGAACC ATGA
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| Protein sequence | MSNTSSPSSL DQAALEGADD EAVTARARPR SRVPFAGNRK ATLGLVILGV YLLLAIVGPW
LAPFDPDARS ADLLMPPSST HWLGTTHLGQ DLLSQLLVGT RGVMVVGLSA GILATILSVL
IGVSAGYLGG VWDDVLSALS NVFLVIPALP LIIIVASTFV SAGAVIVAAT IGFTSWAWGA
RVLRAQTLSL RRRDYIEAAR ASGESTWRIV LFEILPNLTA IIASSFVGTV IFAVTTEITL
AFIGIGGISD WNWGEILFWA QSQQALAQGA WWWFVPAGLA IAFLGTALAL LNFGIDEFVS
PRLRSAGKSK VKTADGRTVR MRVGFTPVLD SAAAAANAAP SAHSLRTAAG SGPTHTPPSN
QPPSSKQPVL EIRHLHVDYG LGDEAVHAVR DVQLTLHRGE VLGLAGESGS GKSTLAYGLT
RLLAPPGAVA SGEVIYHPAQ GAPYDVLKLS DSELRKFRWA ETAIVFQGAM NSLNPVHKVA
TQLHDVLRAH EPELSPESRD ARCREMLKLV GISADRMDAY PHQLSGGMRQ RVMIAMALIL
RPQVVIMDEP TTALDVVMQR QILGQLVELR ERLGFSVIFI THDLSLLVEF SDRIAIMYGG
QIVEEAPAAT LYRDSLHPYS AGLLSSFPAL RGPRRELSGI PGSPPDLKGM PGGCSFHPRC
SRAFGPCRTD TPVLGQPDTA DGASRSVACW LHPAAGSVDA DTASGAPIPG ELVPLRLSHP
SSSPGEP
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