Gene Dvul_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0778 
Symbol 
ID4662623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp955618 
End bp956520 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content64% 
IMG OID639818995 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_966227 
Protein GI120601827 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0620007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.517219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC CACACAGCAA CGCGGGCACC GAAACCGGAA CCCCTTTCGT CCCCCCACCC 
GCGACGACGT CACGGCCCTC CACATCCCGA TTCTGGCAGA GGAACATCCT CTTCGCCATC
GGCTTTGCCA TCGTCGGCAG CATGTCCCTG CTTGCGCTGC TGGCACCTTG GATTGCGCCC
TACGACCCCA CGGCCCTGCA TCTCGACACC ATCCTGTCGG GCCCGTCCGC CACACACCTG
CTTGGTACGG ACGCGCTTGG TCGCGACGTG CTCTCTCGCC TGCTGTACGG GGCGCGCGTC
TCGCTATGGG TAGGCTTCGT CTCCGTGGGT ATCGCCGTAG CCATCGGTCT CGCCGTGGGC
CTCGTCGCGG GGTATTTCGG CGGCATCATC GACGAACTCG CCATGCGCCT TGTGGACATC
ATGCTGTGCT TTCCCTCGTT TTTCCTCATC CTTGCGGTCA TCGCCTTTCT CGAACCAAGC
CTTGGCAACA TCATGGCTGT CATCGGGCTG ACCTCATGGA TGGGAGTGGC GCGGCTGGTA
CGCGCCGAGA CCCTCTCACT GCGGGAACGG GAATTCGTGG CGGCCGCCCG CCTTGCCGGG
GCCGGGCGCA CACGCATCAT CCTCACCCAC ATCCTGCCCA ATGCGATGGC ACCGGTGCTG
GTTTCGGCGA CGCTGGGCGT AGCCGGGGCC ATTCTCACCG AGTCGGCCCT CAGCTTTCTG
GGCCTCGGGG TGCAGCCGCC CGACCCCAGC TGGGGCAACA TGCTGCTGGA GGGCAAGGAC
GTTCTGGAAA TCGCCCCGTG GATGTCGCTC TTCCCCGGCC TTGCCATCCT TGTCACCGTA
CTCGGATACA ACCTGCTGGG TGAGAGTCTG CGCGACTTTC TCGACCCGCG CCTGAAAAAA
TAG
 
Protein sequence
MNAPHSNAGT ETGTPFVPPP ATTSRPSTSR FWQRNILFAI GFAIVGSMSL LALLAPWIAP 
YDPTALHLDT ILSGPSATHL LGTDALGRDV LSRLLYGARV SLWVGFVSVG IAVAIGLAVG
LVAGYFGGII DELAMRLVDI MLCFPSFFLI LAVIAFLEPS LGNIMAVIGL TSWMGVARLV
RAETLSLRER EFVAAARLAG AGRTRIILTH ILPNAMAPVL VSATLGVAGA ILTESALSFL
GLGVQPPDPS WGNMLLEGKD VLEIAPWMSL FPGLAILVTV LGYNLLGESL RDFLDPRLKK