Gene Aaci_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1898 
Symbol 
ID8425419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1946201 
End bp1947196 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content63% 
IMG OID645028014 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003185299 
Protein GI258511865 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTCG CAGCCATCGA TGTGGTGGAT CCGCGCGCGA AGCGGGCGAG CAGGCGCAGA 
AACTCGGCGT TGCGCCAGTT CTTTCGAAAT CCGAAGGCGC TCGCGGGCGT CGTCCTGTTT 
GGCATGTTTC TGGTGGTGGC CATTTTTGCG CCTGCCATCG CGCCCTACAA TCCAACTTCC 
ACGGCGTTTG GCATGCTGCA ACCTCCGTCG CACGCGCACT GGTTCGGCAC GACGAGCCTT 
GGCCAGGACG TGTTTTCACA GTTCATCTGG GGCACGCGGA CCACGCTCAT CGTGGGCGTC 
GGAGCGGGGC TTTTGAGCAC CGTGATCGCC ATCCTGATCG GCGTGACGGC AGGGTATGTC 
GGCGGCGTGG TCGATTCAAT CCTAAACGCG CTCTGTAACA TTTTCCTCGT CATGCCGGGA 
TTGGCGCTGC TCATCATCAT CGAATCGTAC GTGCACAACA CGACGCCGTA TATGAACGGT 
CTGATCATCG CGCTGACGGG CTGGGCGTGG GGCGCGCGCG TGATGCGGTC CATGGCCATG 
ACCATTGCGA GCCGGGATTA CATCGCGGCG GCGCGCCTGT CGGGGATGTC GACGTTCCGC 
ATCATCCTGT TCGAGATCGT GCCGAACATG ACGAGCGTCA TTGCCTCCAA CGTGATGTAC 
GCCTGTCTGG CGGCGGTGCT CGCGGAGTCG GGCCTCGCGT ATCTCGGGTT CGAAAATGTG 
GCCTCGACGA GCTGGGGCAC GATGCTGTAC TGGGCGACGC AGAACAGCGC GCTGATGAGC 
GGGGCGTGGT GGTGGTTCGT GCCGCCGGGG CTCGGCATCG CGCTTCTCGG CACGAGCTTT 
GCCCTGATGA ACTTCGGCAT CGACCAGGTC ACCAACCCGC GTCTGCGCAC GTCGCGCAGG 
CGTCGACAGG TCGAGAAACT GCTGCGCGAG CTTCGGGCGC AGAACGGTGA GGTGAAGGCG 
GATGGCAGAG ACGCGAGAAC CGGTGCTTCA GATTGA
 
Protein sequence
MTVAAIDVVD PRAKRASRRR NSALRQFFRN PKALAGVVLF GMFLVVAIFA PAIAPYNPTS 
TAFGMLQPPS HAHWFGTTSL GQDVFSQFIW GTRTTLIVGV GAGLLSTVIA ILIGVTAGYV 
GGVVDSILNA LCNIFLVMPG LALLIIIESY VHNTTPYMNG LIIALTGWAW GARVMRSMAM 
TIASRDYIAA ARLSGMSTFR IILFEIVPNM TSVIASNVMY ACLAAVLAES GLAYLGFENV 
ASTSWGTMLY WATQNSALMS GAWWWFVPPG LGIALLGTSF ALMNFGIDQV TNPRLRTSRR 
RRQVEKLLRE LRAQNGEVKA DGRDARTGAS D