| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6186 |
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| Symbol | |
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| ID | 8330397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7249508 |
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| End bp | 7251280 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644946618 |
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| Product | ABC transporter related |
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| Protein accession | YP_003103837 |
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| Protein GI | 256380177 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCC TCGCTCCCGT GCCCGCCGCC GAACCGGCGG TGCGCGCGGG CTGGCGCTCG
ATGCTGCCGC GCTGGTCGCC GAAGCTGGCG GTCGGACTCG GCCTGATCGG GGCCATCGCG
CTGTTCGCGC TGCTCGGGCC GCTGCTCACC GGCGACCCGG CCACCATCCG CGACATCGGC
CTCACCCCGC CCGGCGGCGA GCACTTGCTG GGCACCACCC AGACCGGCCA GGACGTGCTC
GCCCAGCTCG CCCACGCCAC CGGCGGCTCG CTCAAGCTCG GGCTGACCGT CGGGGTGCTG
GCCACGCTGC TGTCCGCGCT GTTCGGCATC GTCGGCACCT ACGTCGGCGG TGTGGTGGAC
GAATCGTTCT CGTTGTTCTC CAACGTGATG CTGGTGATCC CGACGCTGCC CCTGGTGATC
GTGATCTCCG CGTTCGTGCC CGCCGAGCAG CGCGGCGCGT GGACCATCGC CCTGGTGCTG
GCCATCACCG GCTGGGCGGC GTCGGCGCGG GTGCTGCGCG CGCAGACGCT GTCCGTGCGC
ACCAGGGACT ACGTGGCGGC GGCGCGCGTC GCGGGGGAGA AGCCGTGGCG GGTCATCGCC
GTGGAGATCC TCCCGAACCT GCTGCCGCTG CTGGCCTCGC AGTTCGTGTA CACGGTCATC
TCGGCGATCC TCAACGAGGC CGGGCTGTCG TTCCTCGGGC TGGGCGCGTC CAACTCGTCC
ACCCTGGGCA CGATGCTCTA CTACGCGCAG AACGGCTTCG CGCTCCAGCG GGAGGCCTGG
TGGTGGTTCG TGCCGCCGGG GCTGCTCATC GCGCTGTTCG GCTGCGGGCT CGCGCTGGTG
AACTTCAGCA TCGACGAGAT CATCAACCCG AAGCTGCGCG ACGTGCCGCT GCGGGTCAAG
GAGCCCGAGC GCGCCGCCGC GCCCGTGCCG CGCGCCGACG AGGACGCGGT GCTGACCGTG
GAGGGGCTGT CGGTCGAGTA CCGGACCGAG CGGCCGGTGC GGGCGGTGCG GGACGTGTCG
CTGACCCTGC GGCGCGGCGA GATCCTGGGA CTGGCCGGGG AGTCCGGCTG CGGCAAGACC
ACGCTCGCGT ACGCGGTGAG CAGGCTGCAC CGGCCGCCCG CCGAGATCAC CGGCGGGACG
GTCACGTTCC ACGGCGAGCG CGACGAGGAC GTGCTGGCGC TGAGGCCGGA GGAGCTGCGG
GCGTTCCGCT GGTCCGAGCT GTCGATGGTG TTCCAGGGCG CGATGAACGC GCTGAACCCG
GTGACGACGG TCCACGCGCA GCTCGACGAC GTGCTCACCA CCCACCGGCC CGGCATGGCC
AAGGCCGAGC GGCGGGCCAG GTGCGCGGAG GTGCTGGGCC TGGTCGGCGT CGACCCGGCG
CGGCTCGACT CGTACCCGCA CGAGCTGTCC GGCGGGATGC GGCAGCGCGT GGTGATCGCC
ATGGCGCTGC TGCTGAACCC GCAGATCATG GTGATGGACG AGCCGACGAC GGCGCTGGAC
GTCGTGGTGC AGCGGGGCAT CCTGCGGGAG ATCCTGCGGC TGCGCGACGA GATCGGCTTC
GCGGTCCTGC TCATCACCCA CGACCTTCCG CTGCTGCTGG AGGTCGCGGA CCGGATCGCG
GTGATGAAGG ACGGCGAGGT GGTGGAGCTG GCCGACGCGG AGCGGATGCG CCTGCGGCCG
GAGCACCCGT ACACCAGGCA GCTGCTCGAC TCGTTCCCCA GCCTGACCGG GGAGCGCGGT
TCGTTCGTGC GGAGCGGGGG GAGTTCGGCG TGA
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| Protein sequence | MTTLAPVPAA EPAVRAGWRS MLPRWSPKLA VGLGLIGAIA LFALLGPLLT GDPATIRDIG
LTPPGGEHLL GTTQTGQDVL AQLAHATGGS LKLGLTVGVL ATLLSALFGI VGTYVGGVVD
ESFSLFSNVM LVIPTLPLVI VISAFVPAEQ RGAWTIALVL AITGWAASAR VLRAQTLSVR
TRDYVAAARV AGEKPWRVIA VEILPNLLPL LASQFVYTVI SAILNEAGLS FLGLGASNSS
TLGTMLYYAQ NGFALQREAW WWFVPPGLLI ALFGCGLALV NFSIDEIINP KLRDVPLRVK
EPERAAAPVP RADEDAVLTV EGLSVEYRTE RPVRAVRDVS LTLRRGEILG LAGESGCGKT
TLAYAVSRLH RPPAEITGGT VTFHGERDED VLALRPEELR AFRWSELSMV FQGAMNALNP
VTTVHAQLDD VLTTHRPGMA KAERRARCAE VLGLVGVDPA RLDSYPHELS GGMRQRVVIA
MALLLNPQIM VMDEPTTALD VVVQRGILRE ILRLRDEIGF AVLLITHDLP LLLEVADRIA
VMKDGEVVEL ADAERMRLRP EHPYTRQLLD SFPSLTGERG SFVRSGGSSA
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