| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1678 |
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| Symbol | |
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| ID | 4600930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1625389 |
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| End bp | 1626258 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639774451 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_921076 |
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| Protein GI | 119720581 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.771808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCACTT GGTCCAGACT AAAGGCCTCC TTCGTCTGGA GTTTAAAATA CCTTTTAAGG
AAGCAAAGAG TACGCTTCGC ACTCTTCTGG GTACTGTTCA CGATCGTGCT TGCCGCTGTA
GGACCTCTTA TAACCCCGTA CGACCCTACT CAAACGGCGG GACCCCCGCG TCAACCCCCA
TGCAGTAAGT ACTGGCTTGG AACAGACTGG TTCGGCTTCG ACCTATTTAC AAGAGTTGTA
TATGGTCTTA GAGTATCACT CTACGTAGGA GTCATCGCGG CAATTGTCGG AACAACTGTG
GGAGTTCTAC TCGGACTAGT CTCGGGGTAC TTCGGCGGTC TAGTCGATGA AATCGTATCG
TTCGTAGTGA ACTTGCTTCT AACCATACCC CCACTACTCA TAGTGATACT TGTACTCACT
TACATTGGCT TTAGGGGCCT CGAGTTTAAT GGACTGCTGA TAGGATTACT TCAGTGGCAC
TGGGTTGCAA GGGCCGTTCG AAGCATAACA AAGTCCCTCC GTTCTCGAGA CTTCGTTTTA
GTGTCCAGGA TGAGCGGGCT TTCCGCGTTC GAAACCATAC TCAACGATAT TCTCCCAAAT
ATGCTTTCAT ACGTAGCCTT AGTGTTTGTC CTGCAATTCT CAAGTGCCGT ATTCTTCTCA
GTTACACTCG AGTTCTTTGG ACTAGTACCC GGCAACATAA TGTCCATAGG GTTCATACTT
CAACAAGCAG TGCTCTGGAA TGCAATACAG ATGAATGTAT GGTGGTGGGC AATAATACCT
GGAATACTGA TAACGCTGTT TCTGGGTAGC CTCTATGTGA TATCGTCTTC TCTCGACGAG
CTTTTCAATC CTCGGCTAAG GGGTGAATGA
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| Protein sequence | MSTWSRLKAS FVWSLKYLLR KQRVRFALFW VLFTIVLAAV GPLITPYDPT QTAGPPRQPP
CSKYWLGTDW FGFDLFTRVV YGLRVSLYVG VIAAIVGTTV GVLLGLVSGY FGGLVDEIVS
FVVNLLLTIP PLLIVILVLT YIGFRGLEFN GLLIGLLQWH WVARAVRSIT KSLRSRDFVL
VSRMSGLSAF ETILNDILPN MLSYVALVFV LQFSSAVFFS VTLEFFGLVP GNIMSIGFIL
QQAVLWNAIQ MNVWWWAIIP GILITLFLGS LYVISSSLDE LFNPRLRGE
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