| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0904 |
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| Symbol | |
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| ID | 5538370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1183877 |
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| End bp | 1184728 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893054 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001431037 |
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| Protein GI | 156740908 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.639488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTCT TTCGCGATCT TCTCAGAGAT TATCGCTTTG CCATCGCCTT CTGGGTGCTG
TGTCTGCTGA TCGCTTTTGC GGCGCTTTCG CTCTTCTCGC CATACGACCC GACACGCTGG
GGGCAGGCGC CGCGCGACCT GCGCCCCTCG GCAGAGCACT GGCTGGGCAC CGACTCCAAT
GGTCAGGATG TGTTCTGGAA CGCGACCTTC GCCGTGCGCA ACTCGCTGAT CATTGCGGTA
ATCGCCGGCG TTGTCTCGCG CATTATTGCC GTCGCCATCG GGATGGTGGC GGGGTATCGG
GGCGGCATGT GGGACCGGAC GCTCATGTTT GTGAGCGACA GTCTCCTGGT TATTCCCCTC
TTCCTGATCA TTGTGATGAT GGCGATGCTG ATCCGCGCAA GCCTGAACCT GGCGACGCTG
GGGTTATTGC TGGCATTCTT TGGCTGGGCA TGGGATGCAC GTCTCATCCG TTCTCAGATG
TTGAGCCTGC GTGAGCGTGA TTTCACGCAA ACCGCCATCC TTTCCGGCAC GGGAACGCTC
AAACTGGTGA TCAATGAGTA CATGCCGTAC ACCACACCCC TGATCTTCTC AACCCTGATC
AACAATATGG CATGGGCAAT CGGGCTGGAG ATCACACTGG CAATCCTGGG GTTGCTCGAT
ATGTCCATCC CGACGTTGGG GACGATGCTC TACTGGGCTA TCAACTATCA GGCGATCCTG
TTGGGCCGCT GGTGGTGGGT GACGACGCCG ATCTTGCTGT CGGTGCTGCT CTTCATCGCT
CTCTACTGGC TATCGGTCAG CATTAGTGAA TATCTCGATC CACGCACGCG CGTGCAGCGC
GTAGGAGCCT GA
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| Protein sequence | MKLFRDLLRD YRFAIAFWVL CLLIAFAALS LFSPYDPTRW GQAPRDLRPS AEHWLGTDSN
GQDVFWNATF AVRNSLIIAV IAGVVSRIIA VAIGMVAGYR GGMWDRTLMF VSDSLLVIPL
FLIIVMMAML IRASLNLATL GLLLAFFGWA WDARLIRSQM LSLRERDFTQ TAILSGTGTL
KLVINEYMPY TTPLIFSTLI NNMAWAIGLE ITLAILGLLD MSIPTLGTML YWAINYQAIL
LGRWWWVTTP ILLSVLLFIA LYWLSVSISE YLDPRTRVQR VGA
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