Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1592 |
Symbol | |
ID | 8136923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1857605 |
End bp | 1858447 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644869205 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003021405 |
Protein GI | 253700216 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 0.961775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGGAC CTTCCCGCGA ATTCTGGGAA CGCTTCAGCG CCAACCGCTT CGCCCTGGCG GGCCTGGCGG TGATAGCGCT ATTGTTTCTC CTCTCCTTCG CCGCCTCCTT CATAACCCCG TACGATCCCG ACGCCATCGA CGCCTGGCAC GTGCTGCTCC CCCCCTCCGC CGAGCACTGG TTCGGCACCG ACGAATTGGG GCGCGACGTC CTCACCAGGG TGATCTTCGG CGCCCGGGTG TCGCTGAAGG TCGGCTTTGT GGCGGTCGGC ATAGCCGTGG CGGTCGGTAC GGTGGTGGGA CTCGTCGCCG GATTCTACGG CGGCTGGGTC GATTCGGTGC TGATGCGGAT GGTGGACATC ATGCTCTGTT TCCCCACCTT CTTCCTGATC CTGGCGGTGA TCGCCATGCT GGAGCCGTCC ATCTGGTACA TCATGGTCAT CATCGGGCTC ACCGGCTGGA TGGGGGTGGC GCGCCTGGTG CGGGCCGAGG TCCTTTCCCT GAAGAGCCGC GACTTCATCT CCGCGGCGAG GGTGCTGGGC GCGTCGGATA GGCGCATCAT CTTCCGGCAC ATCCTCCCCA ACGCCCTCTC CCCTGTGCTG GTTTCCGCGA CGCTTGGGGT GGCCGGAGCG ATCCTCACCG AGTCCGCGCT CTCCTTCCTC GGCATCGGGG TGCAGCCGCC GACCCCCAGT TGGGGCAACA TCCTCACCTC CGGCAAGGAC TACATCGAGT TCGCCTGGTG GCTTTCCCTG TTTCCTGGTG TGGCCATCCT GGTCACGGTC CTCTCCTACA ACCTGGTGGG GGAGGGTATC CGCGACGCGC TCGACCCGAG AAGGCAAAGG TGA
|
Protein sequence | MNGPSREFWE RFSANRFALA GLAVIALLFL LSFAASFITP YDPDAIDAWH VLLPPSAEHW FGTDELGRDV LTRVIFGARV SLKVGFVAVG IAVAVGTVVG LVAGFYGGWV DSVLMRMVDI MLCFPTFFLI LAVIAMLEPS IWYIMVIIGL TGWMGVARLV RAEVLSLKSR DFISAARVLG ASDRRIIFRH ILPNALSPVL VSATLGVAGA ILTESALSFL GIGVQPPTPS WGNILTSGKD YIEFAWWLSL FPGVAILVTV LSYNLVGEGI RDALDPRRQR
|
| |