| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1435 |
|---|
| Symbol | |
|---|
| ID | 2686056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1573971 |
|---|
| End bp | 1574819 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637126109 |
|---|
| Product | peptide ABC transporter, permease protein |
|---|
| Protein accession | NP_952486 |
|---|
| Protein GI | 39996535 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.557175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTACC GCGACAGCTG GTTCCATACG GTCTTCTGGA AACGTTTCCG GCGCAACCGT
TTCGCCCTGG CCGGCGGCGT GGTTGTGGTG GTGCTCTTTG CCATCTCGTT CCTGGCTCCC
TACATCGCCC CCTGGGACCC GGACGCCATC GACGCCTACC GCGTTCTGCT CCCGCCGTCG
GCCGAACACT GGTTCGGGAC CGACGAACTG GGGCGGGACG TCTTTACCCG TGTCATCTAC
GGAGCCAGGA TCTCGCTCAA GGTGGGATTC GTATCAGTAG GCATCGCCGT GGTTATCGGC
ACGGTGCTCG GTCTCGTCTC CGGATTCTAC GGCGGGCTTG TCGATACGAT TATCATGCGG
TTCGTGGACA TCATGCTCTG CTTCCCCACG TTTTTTCTCA TCCTCGCGGT GATCGCCTTT
CTGGAGCCGT CTATCTGGTA CATTATGGCC ATCATCGGCC TCACGGGCTG GATGGGAGTG
GCCCGGCTCG TGCGGGCCGA GGTCCTGTCG CTGCGGGAGC GTGATTTCGT GCTGGCTGCC
CGCGCCCTCG GCGCATCGGA TGTGCGGATA CTGCTCCGCC ATGTCCTGCC AAACGCCGTA
TCGCCGGTCC TGGTGTCCGC CACCCTTGGT GTGGCCGGCG CAATTCTCAC CGAATCGGCT
CTGTCTTTTC TCGGCATCGG GGTCCAGCCC CCCACGCCGA GCTGGGGTAA CATCCTCACC
TCCGGCAAGG ACTACATCGA GTTCGCCTGG TGGCTTTCGC TGTTCCCCGG CGGAGCCATC
CTGGTGACCG TTCTGGCCTA CAATCTGTTG GGCGAGGGAA TCAGGGACGC CCTTGACCCG
CGGGTCTGA
|
|---|
| Protein sequence | MAYRDSWFHT VFWKRFRRNR FALAGGVVVV VLFAISFLAP YIAPWDPDAI DAYRVLLPPS
AEHWFGTDEL GRDVFTRVIY GARISLKVGF VSVGIAVVIG TVLGLVSGFY GGLVDTIIMR
FVDIMLCFPT FFLILAVIAF LEPSIWYIMA IIGLTGWMGV ARLVRAEVLS LRERDFVLAA
RALGASDVRI LLRHVLPNAV SPVLVSATLG VAGAILTESA LSFLGIGVQP PTPSWGNILT
SGKDYIEFAW WLSLFPGGAI LVTVLAYNLL GEGIRDALDP RV
|
|---|
| |