| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1621 |
|---|
| Symbol | |
|---|
| ID | 6093070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1638475 |
|---|
| End bp | 1639350 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642488822 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001739640 |
|---|
| Protein GI | 170289402 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00767174 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA TAGTAAGAGT TTTCAGAGAT CTTTTTAGAG ATTATCGATT CACAGTAGCT
TTCATTGCCT TGCTGTTCCT TCTTGTTCTA TCTCTATTGT CTTATGTATC ACCGTATGAT
CCCGTAAGCA TATACCAGGT ACCACGTGGA CTTCCCCCTT CTTTTGAACA TCCTTTTGGT
ACTAACTGGC TCGGTCAGGA TGTATTCTGG CGTTTAACAT TTGCTGTTAG AAATTCACTC
TTGATAGCTG TCATAACAGC TTTCTTCTCA CGTATCATTG CAATTATTGT TGGAATAGTA
TCGGGTTATA AAGGTGGAAC ATTGGATCGG GTGTTGATGA CAATTGGAGA TACAACAATG
GTTCTGCCAA TTTTGATTGT TCTCATAGTG ATTTCCATGA TTCTAAAAGA CTGGGCTCGA
TCGTTTGTCA ACCTGGGTCT GTTACTGGCG TTCTTTTCGT GGGCTTGGGA TGCACGTGTT
ATAAGATCTC AGGTACTCAG CGTTAGGGAG AGAGATTTTG TTCGTGTAGC AGTTCTCTCC
GGTATGTCAA CCATGAAAAT CGTTGGTAAG CAACTTCTTC CTCACGTTTT ACCTGTGATA
TTCACGACCT TTATAAACAA CATGTCGTGG GCAATCGGGA TGGAAATTAC CTTGGCTTAC
TTGGGATTAG GAATAGATCC TACCGTTCCG ACACTTGGGA CCATGCTTCA GAGAGCTATA
ACCAGACAAG CTTTGTTCCT TGGGTTATGG TGGTGGCTTG CTGCTCCTAT AGTAACCGCT
GTATTGCTTT TCATAGCCCT TTACTGGTTA TCGGTGAGTA TAAGTGAGTA TCTCGATCCA
AGGGCACGTT TTCAGAGAGT TGGTGCTGGA AAGTAG
|
|---|
| Protein sequence | MKQIVRVFRD LFRDYRFTVA FIALLFLLVL SLLSYVSPYD PVSIYQVPRG LPPSFEHPFG
TNWLGQDVFW RLTFAVRNSL LIAVITAFFS RIIAIIVGIV SGYKGGTLDR VLMTIGDTTM
VLPILIVLIV ISMILKDWAR SFVNLGLLLA FFSWAWDARV IRSQVLSVRE RDFVRVAVLS
GMSTMKIVGK QLLPHVLPVI FTTFINNMSW AIGMEITLAY LGLGIDPTVP TLGTMLQRAI
TRQALFLGLW WWLAAPIVTA VLLFIALYWL SVSISEYLDP RARFQRVGAG K
|
|---|
| |