Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0173 |
Symbol | |
ID | 8322226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 182612 |
End bp | 183541 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644951320 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003108815 |
Protein GI | 256370991 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.383419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACGC CCGTGACGAG CGCGCCGGCA CCGGCTGGGG CAGAGGCTGC GGCTCCGGTG CAGTCGGGGT CGAGGGCGCG AGCTTCTCTC GCGCGGATCG TCGGGGCGCT CTGGTCGAAC GTGCGAGCTC GGATCGGCAT CGTCATCCTC CTCGCCTTCG TGCTCATGGC GCTCGCCGCA CCGCTGATCG CGCCCTACTC CCCGACGGCG ACGTCGTTTG CCGACTCCCT GCCCCCGAGC GCTGCGCATC TGCTCGGCAC CACCTCGAGC GGCCAGGACG CCCTCTCGCA GCTGCTCTAC GGAGCGCGTA CCTCGGTGCT CGTGGCCTTC GCCGCCGGCG GCATCTCCAC CGTCGTCGCC ATCGTGGTCG GACTGATCGC TGGGTTCTCG CGCGGGATCG TGGACGAGAC CCTGAGCTTC GTGATGAACG TGATGCTCGT CATCCCCGGG CTTCCGCTCA TGATCGTCAT CACCGCCTAC CTGCCGGGTC GAGGTCCCGG TGTGATCATC GCGGTCATCG CCCTCACCGG GTGGGCGTGG GGAGCGCGCG TGCTCCGAAG TCAGGCGAAG TCGGTGAGCG CCCGTGACTT CGTGCTCGCT GCACGCCTGG CCGGAGATTC GTCCTGGCGC ATCGTGTTCC GCGAGATCCT CCCCAACATG ACGTCGCTCA TCGCGGCGAG CTTCTTCGGC GCGGCGACCG CCGCGGTGCT CGCCGAGGCC GGACTCGAGT TCCTCGGGCT CGGCAATCCG AACGCCGTGA GTTGGGGGAC GATGCTCTAC TGGGCGGAGA ACTCCAATGC GTTGCTGACG GGCCAGTGGG GCGTCATCGT CGGTCCGGGT CTGTGCATCG CACTCCTGGC CTCCTCGCTG TCGCTCATCA ACTTCGGTGT CGATGCGCTC TCGAATCCCC GGCTGAGGGA GCGCGCATGA
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Protein sequence | MSTPVTSAPA PAGAEAAAPV QSGSRARASL ARIVGALWSN VRARIGIVIL LAFVLMALAA PLIAPYSPTA TSFADSLPPS AAHLLGTTSS GQDALSQLLY GARTSVLVAF AAGGISTVVA IVVGLIAGFS RGIVDETLSF VMNVMLVIPG LPLMIVITAY LPGRGPGVII AVIALTGWAW GARVLRSQAK SVSARDFVLA ARLAGDSSWR IVFREILPNM TSLIAASFFG AATAAVLAEA GLEFLGLGNP NAVSWGTMLY WAENSNALLT GQWGVIVGPG LCIALLASSL SLINFGVDAL SNPRLRERA
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