Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0874 |
Symbol | |
ID | 6092304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 902046 |
End bp | 902900 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642488072 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001738909 |
Protein GI | 170288671 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGTGT TGAAAGATCT GTTGAGAGAT ACACGTTTCA GATTCGGTTT CATAGTTCTT CTGGTACTTT TGACACTCTC TATCCTGTCT TTCTTTTCAC CGTACAACCC GTACCTGTGG AATCAGGTCC CGAGGGATCT TCCACCCCAT TGGCCTCACA TACTTGGAAC CAACTCGATG GGACAGGACA TTTTCTGGAA ACTCACTTTC GCTGTGAGAA ACTCACTTGT CATGTCACTG ATCGCGGGAC TTGTATCGAG AGTCATAGCC ATGATCGTCG GTATGATAGC CGGATACAAA GGAGGAGCCG CAGATAGGGT CCTGACATTT CTCAGCGATT CTTTCCTTGT GATACCACTT TTCATAATAA TAGTTCTGGT TGCTTCTATT GTAAAGGGAC GTTTGAGTCT TCCCATGCTT GGGCTTCTCC TTGGAGTCTT TGGTTGGGCA TGGGATGCGA GAGTGATCAG GTCTCAGGTT TTGAGTTTGA GGGAAAGAGA TTTCACCTAC ACTGCTCTTC TCTCTGGATC AAAAGCTCTT TCGATCGTTT TCAAAGAGTA TCTACCGTTT CTGATACCGC TCATATTCGC CACTCTCATA GGTAACATGT CCTGGGCTAT TGGAATGGAA ATCACACTCG CGATACTGGG TGTGTCGAAC CTGGACATAC CCACACTCGG TACCATGCTT CAATGGTCGA TAAACTACCA GGCCCTTCTA CTGGGATACT GGTGGTGGGT GCTGACTCCT GTTTTAACGT CTATCTTTTT GTTCATAGCG CTGTATCTGA TCTCAATCAG CATCAGTGAG TACTTGGATC CGAGGATGAG GATACAGAGA ATAGGACAGG CATGA
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Protein sequence | MQVLKDLLRD TRFRFGFIVL LVLLTLSILS FFSPYNPYLW NQVPRDLPPH WPHILGTNSM GQDIFWKLTF AVRNSLVMSL IAGLVSRVIA MIVGMIAGYK GGAADRVLTF LSDSFLVIPL FIIIVLVASI VKGRLSLPML GLLLGVFGWA WDARVIRSQV LSLRERDFTY TALLSGSKAL SIVFKEYLPF LIPLIFATLI GNMSWAIGME ITLAILGVSN LDIPTLGTML QWSINYQALL LGYWWWVLTP VLTSIFLFIA LYLISISISE YLDPRMRIQR IGQA
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