More than 300 homologs were found in PanDaTox collection
for query gene Aboo_1082 on replicon NC_013926
Organism: Aciduliprofundum boonei T469



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013926  Aboo_1082  response regulator receiver protein  100 
 
 		 194 aa  386  1e-106  Aciduliprofundum boonei T469  Archaea  normal  0.167563  n/a   
 
 
-
 
NC_011831  Cagg_3265  two component transcriptional regulator, winged helix family  33.33 
 
 		 245 aa  89.4  3e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.45002  normal  1 
 
 
-
 
NC_012034  Athe_1751  two component transcriptional regulator, winged helix family  38.26 
 
 		 234 aa  89.4  3e-17  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_3269  two component, sigma54 specific, Fis family transcriptional regulator  41.28 
 
 		 467 aa  89  4e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.382263 
 
 
-
 
NC_010001  Cphy_2121  two component transcriptional regulator  39.34 
 
 		 231 aa  88.2  6e-17  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  36.22 
 
 		 236 aa  87  1e-16  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_2155  two component transcriptional regulator  35.94 
 
 		 261 aa  87  1e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  0.102637  normal  0.128892 
 
 
-
 
NC_011886  Achl_2443  two component transcriptional regulator, winged helix family  33.82 
 
 		 224 aa  86.7  2e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00121019 
 
 
-
 
NC_009441  Fjoh_1620  two component transcriptional regulator  40.17 
 
 		 228 aa  86.7  2e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  36.51 
 
 		 494 aa  86.7  2e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_1017  two component transcriptional regulator  35.25 
 
 		 229 aa  86.3  3e-16  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.957911  normal  0.735899 
 
 
-
 
NC_013172  Bfae_21090  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  33.87 
 
 		 231 aa  86.3  3e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  0.664911  n/a   
 
 
-
 
NC_012803  Mlut_14770  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  34.35 
 
 		 226 aa  85.5  5e-16  Micrococcus luteus NCTC 2665  Bacteria  normal  0.383411  n/a   
 
 
-
 
NC_010682  Rpic_1760  two component heavy metal response transcriptional regulator, winged helix family  34.78 
 
 		 225 aa  85.1  6e-16  Ralstonia pickettii 12J  Bacteria  normal  0.133831  normal  0.402692 
 
 
-
 
NC_007971  Rmet_5978  regulatory protein CzcR  34.78 
 
 		 225 aa  85.1  6e-16  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.0000269255  normal  0.0723212 
 
 
-
 
NC_010511  M446_3564  two component transcriptional regulator  36.13 
 
 		 230 aa  85.1  6e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.153344  normal  0.125376 
 
 
-
 
NC_011894  Mnod_0815  two component transcriptional regulator, winged helix family  37.6 
 
 		 246 aa  84  0.000000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.404408  n/a   
 
 
-
 
NC_013946  Mrub_0031  two component transcriptional regulator, winged helix family  33.61 
 
 		 234 aa  84  0.000000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011892  Mnod_8578  two component transcriptional regulator, winged helix family  39.5 
 
 		 231 aa  83.6  0.000000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0565107  n/a   
 
 
-
 
NC_013501  Rmar_0819  two component transcriptional regulator, winged helix family  30 
 
 		 246 aa  84  0.000000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_003296  RS03140  two component response regulator transcription regulator protein  32.08 
 
 		 245 aa  83.6  0.000000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.249511  normal  1 
 
 
-
 
NC_009664  Krad_3815  two component transcriptional regulator, winged helix family  35.16 
 
 		 225 aa  83.6  0.000000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0278114  normal  0.0118387 
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  36.13 
 
 		 385 aa  83.6  0.000000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_007963  Csal_2418  two component transcriptional regulator  39.83 
 
 		 237 aa  83.2  0.000000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1119  sensor histidine kinase/response regulator  40.68 
 
 		 420 aa  82.8  0.000000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  30.54 
 
 		 237 aa  82.8  0.000000000000003  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_2620  two component, sigma54 specific, Fis family transcriptional regulator  29.41 
 
 		 532 aa  82.8  0.000000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0658498  normal  1 
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  34.11 
 
 		 231 aa  82.4  0.000000000000004  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_007777  Francci3_0978  two component transcriptional regulator  33.88 
 
 		 321 aa  82.4  0.000000000000004  Frankia sp. CcI3  Bacteria  normal  0.323902  normal  1 
 
 
-
 
NC_007908  Rfer_0247  two component, sigma54 specific, Fis family transcriptional regulator  31.03 
 
 		 467 aa  82.4  0.000000000000004  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  29.6 
 
 		 231 aa  82.4  0.000000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.312171 
 
 
-
 
NC_013440  Hoch_5158  transcriptional regulator, XRE family  31.97 
 
 		 198 aa  82.4  0.000000000000004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.503819  normal  0.690311 
 
 
-
 
NC_010571  Oter_0318  two component transcriptional regulator  34.96 
 
 		 241 aa  82.4  0.000000000000004  Opitutus terrae PB90-1  Bacteria  normal  0.523003  normal  0.212939 
 
 
-
 
NC_003910  CPS_0681  DNA-binding response regulator  35.71 
 
 		 246 aa  82  0.000000000000005  Colwellia psychrerythraea 34H  Bacteria  normal  0.63003  n/a   
 
 
-
 
NC_007347  Reut_A0573  two component transcriptional regulator  34.96 
 
 		 243 aa  82  0.000000000000005  Ralstonia eutropha JMP134  Bacteria  normal  0.437899  n/a   
 
 
-
 
NC_007973  Rmet_0515  two component transcriptional regulator  34.96 
 
 		 244 aa  82  0.000000000000005  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000767404  normal  0.580599 
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  30.33 
 
 		 231 aa  82  0.000000000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_010086  Bmul_3459  two component transcriptional regulator  33.33 
 
 		 246 aa  81.6  0.000000000000006  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.368834  normal  1 
 
 
-
 
NC_011146  Gbem_3634  response regulator receiver sensor signal transduction histidine kinase  36.15 
 
 		 379 aa  81.6  0.000000000000006  Geobacter bemidjiensis Bem  Bacteria  normal  0.0261897  n/a   
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  32.84 
 
 		 147 aa  81.6  0.000000000000006  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008010  Dgeo_2844  two component transcriptional regulator  31.58 
 
 		 248 aa  81.6  0.000000000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_2712  two component transcriptional regulator  31.62 
 
 		 224 aa  81.6  0.000000000000006  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00552555  n/a   
 
 
-
 
NC_007974  Rmet_3934  DNA-binding response regulator  32.81 
 
 		 223 aa  81.6  0.000000000000007  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_3739  response regulator receiver sensor signal transduction histidine kinase  36.09 
 
 		 379 aa  81.3  0.000000000000008  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009767  Rcas_2487  two component transcriptional regulator  34.65 
 
 		 224 aa  81.3  0.000000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.431556  normal  1 
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  34.38 
 
 		 261 aa  81.3  0.000000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_002947  PP_1012  winged helix family two component transcriptional regulator  34.17 
 
 		 241 aa  80.5  0.00000000000001  Pseudomonas putida KT2440  Bacteria  normal  0.0418267  normal  1 
 
 
-
 
NC_004310  BR1521  transcriptional regulatory protein OmpR, putative  34.88 
 
 		 241 aa  80.5  0.00000000000001  Brucella suis 1330  Bacteria  normal  0.675435  n/a   
 
 
-
 
NC_009523  RoseRS_2290  two component transcriptional regulator  33.59 
 
 		 224 aa  80.5  0.00000000000001  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_6397  response regulator receiver protein  32.26 
 
 		 237 aa  80.5  0.00000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.680662  normal  0.0804167 
 
 
-
 
NC_009767  Rcas_3309  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  28.28 
 
 		 900 aa  80.9  0.00000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.269875  normal  0.342346 
 
 
-
 
NC_013203  Apar_0090  two component transcriptional regulator, winged helix family  36.28 
 
 		 226 aa  80.5  0.00000000000001  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  33.61 
 
 		 406 aa  80.9  0.00000000000001  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_1190  two component transcriptional regulator  33.85 
 
 		 248 aa  80.9  0.00000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.882993  normal  1 
 
 
-
 
NC_011729  PCC7424_1341  two component transcriptional regulator, winged helix family  32.74 
 
 		 226 aa  80.5  0.00000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_009512  Pput_1050  two component transcriptional regulator  34.17 
 
 		 260 aa  80.9  0.00000000000001  Pseudomonas putida F1  Bacteria  normal  0.36572  normal  1 
 
 
-
 
NC_010322  PputGB1_1011  two component transcriptional regulator  34.17 
 
 		 241 aa  80.9  0.00000000000001  Pseudomonas putida GB-1  Bacteria  normal  0.675078  normal  1 
 
 
-
 
NC_010524  Lcho_1895  osmolarity response regulator  36 
 
 		 244 aa  80.9  0.00000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0546897 
 
 
-
 
NC_008740  Maqu_1287  two component transcriptional regulator  36.28 
 
 		 221 aa  80.5  0.00000000000001  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.00449543  n/a   
 
 
-
 
NC_008740  Maqu_3217  two component transcriptional regulator  36.28 
 
 		 221 aa  80.5  0.00000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.164246  n/a   
 
 
-
 
NC_009921  Franean1_3859  two component transcriptional regulator  29.32 
 
 		 235 aa  80.9  0.00000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal  1 
 
 
-
 
NC_009505  BOV_1472  putative transcriptional regulatory protein OmpR  34.88 
 
 		 241 aa  80.5  0.00000000000001  Brucella ovis ATCC 25840  Bacteria  normal  0.830233  n/a   
 
 
-
 
NC_009504  BOV_A0413  putative transcriptional regulatory protein OmpR  29.27 
 
 		 238 aa  80.5  0.00000000000001  Brucella ovis ATCC 25840  Bacteria  normal  0.16231  n/a   
 
 
-
 
NC_009504  BOV_A0210  DNA-binding response regulator  34.21 
 
 		 225 aa  80.5  0.00000000000001  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_0451  two component heavy metal response transcriptional regulator  32.33 
 
 		 230 aa  80.1  0.00000000000002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004311  BRA0474  transcriptional regulatory protein OmpR, putative  32.59 
 
 		 238 aa  79.7  0.00000000000002  Brucella suis 1330  Bacteria  normal  0.558106  n/a   
 
 
-
 
NC_010678  Rpic_4185  two component transcriptional regulator, winged helix family  33.12 
 
 		 243 aa  80.5  0.00000000000002  Ralstonia pickettii 12J  Bacteria  normal  0.469867  normal  1 
 
 
-
 
NC_013946  Mrub_3033  two component transcriptional regulator, winged helix family  36.7 
 
 		 218 aa  80.1  0.00000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.190199 
 
 
-
 
NC_007796  Mhun_2749  response regulator receiver domain-containing protein  31.11 
 
 		 436 aa  79.7  0.00000000000002  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_3400  two component transcriptional regulator  29.03 
 
 		 224 aa  80.1  0.00000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.105495  n/a   
 
 
-
 
NC_012857  Rpic12D_4297  two component transcriptional regulator, winged helix family  33.12 
 
 		 243 aa  80.5  0.00000000000002  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_0977  two component transcriptional regulator, winged helix family  28.23 
 
 		 242 aa  79.7  0.00000000000002  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  37.39 
 
 		 129 aa  80.1  0.00000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_009668  Oant_3516  two component transcriptional regulator  35.54 
 
 		 222 aa  79.7  0.00000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.796525  n/a   
 
 
-
 
NC_009667  Oant_1644  two component transcriptional regulator  35.43 
 
 		 235 aa  80.1  0.00000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  31.3 
 
 		 236 aa  79.7  0.00000000000002  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
NC_013216  Dtox_0970  two component, sigma54 specific, transcriptional regulator, Fis family  38.32 
 
 		 459 aa  80.1  0.00000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000694494  normal  0.524712 
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  37.27 
 
 		 227 aa  79.7  0.00000000000003  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_010725  Mpop_0949  two component transcriptional regulator, winged helix family  33.9 
 
 		 229 aa  79.3  0.00000000000003  Methylobacterium populi BJ001  Bacteria  normal  0.0140851  normal  1 
 
 
-
 
NC_009972  Haur_0905  two component transcriptional regulator  32.85 
 
 		 238 aa  79.3  0.00000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_0170  two component transcriptional regulator, winged helix family  33.59 
 
 		 232 aa  79.3  0.00000000000003  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  31.97 
 
 		 224 aa  79.7  0.00000000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_010172  Mext_0516  response regulator receiver  34.53 
 
 		 247 aa  79.3  0.00000000000003  Methylobacterium extorquens PA1  Bacteria  normal  0.62167  normal  1 
 
 
-
 
NC_009675  Anae109_2379  two component, sigma54 specific, Fis family transcriptional regulator  32.79 
 
 		 446 aa  79.3  0.00000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.373235  normal  0.0399931 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  31.71 
 
 		 470 aa  79.3  0.00000000000003  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_008554  Sfum_2092  two component, sigma54 specific, Fis family transcriptional regulator  31.29 
 
 		 462 aa  79.3  0.00000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.131918 
 
 
-
 
NC_008699  Noca_3826  response regulator receiver  36.67 
 
 		 228 aa  79.3  0.00000000000003  Nocardioides sp. JS614  Bacteria  normal  0.0204609  n/a   
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  32.06 
 
 		 508 aa  79.3  0.00000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  32.09 
 
 		 141 aa  79.7  0.00000000000003  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  33.07 
 
 		 223 aa  79  0.00000000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_0634  two component transcriptional regulator  34.17 
 
 		 255 aa  79  0.00000000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.823943  normal  1 
 
 
-
 
NC_007777  Francci3_2401  two component transcriptional regulator  29.92 
 
 		 283 aa  79  0.00000000000004  Frankia sp. CcI3  Bacteria  normal  0.0476592  normal  0.0197415 
 
 
-
 
NC_007948  Bpro_4464  response regulator receiver domain-containing protein  31.9 
 
 		 250 aa  79  0.00000000000004  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.579086 
 
 
-
 
NC_008009  Acid345_0509  two component transcriptional regulator  31.97 
 
 		 232 aa  79  0.00000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163629  normal  1 
 
 
-
 
NC_009674  Bcer98_1815  two component transcriptional regulator  31.06 
 
 		 232 aa  79  0.00000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.101184  n/a   
 
 
-
 
NC_009338  Mflv_3002  response regulator receiver/unknown domain-containing protein  36.52 
 
 		 221 aa  79  0.00000000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.0266393 
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  33.8 
 
 		 396 aa  79  0.00000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_2806  two component, sigma54 specific, Fis family transcriptional regulator  32.74 
 
 		 450 aa  79  0.00000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2652  two component transcriptional regulator, winged helix family  30.15 
 
 		 264 aa  79  0.00000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008576  Mmc1_3443  response regulator receiver protein  32.81 
 
 		 223 aa  79  0.00000000000004  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
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