| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1620 |
|---|
| Symbol | |
|---|
| ID | 5090971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1869309 |
|---|
| End bp | 1869995 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644741027 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001193971 |
|---|
| Protein GI | 146299380 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTGTT TTATGAATGT TTTAATTGTA GAAGATAATA AAGAGCTTGC CGTTGAAGTT
TACGACTTTT TGAGCAAAGC AGGTTATATC TGTAAAATTG CGAATAATTG TGCCGATGCT
CTCGAAGAAT TTGGAAGTAA TGATTATGAT GCTATGCTGC TTGATCTTGG TTTGCCGGAC
GGAGATGGTT TTGAGGTTTT GCAGACCATT CGAAAAACAA AATCAAAAAT TGCAGTAATT
GTACTTACTG CCCGCGGTGA ACTAGATGAT AGAATTAATG GACTTCATTT GGGAGCTGAT
GATTATTTAA CGAAACCTTT TGCTTTGACA GAATTGGCTG CCAGATTGTT TGCCGTAATC
CGACGAATTC ATGGTTTTAC TTTAAATAAC TTAAGTATTC ACGGTTTTTT GCTGCAGCTT
CAGGATTATA AAGTGAGTTT TAATGAGGTG CCTTTGAGTT TAACAAAAAA GGAATTTGAT
ATTTTTCAAT ATTTGGTTTT GAATAAAAAC AGAGTAATTA CAAGACTGCA ATTAACAGAA
CATATTTGGG GCGATATTCT GGAAATAAAT TCAGATTCTA ATTTTATAGA TGTGCATGTT
CGAAACCTTC GAAAAAAATT AGACAAACAC ACTTCAATAG ATTGGTTTGA AACGGTTCGA
AATGTGGGGT ATCGTATTAA TGAATAA
|
|---|
| Protein sequence | MPCFMNVLIV EDNKELAVEV YDFLSKAGYI CKIANNCADA LEEFGSNDYD AMLLDLGLPD
GDGFEVLQTI RKTKSKIAVI VLTARGELDD RINGLHLGAD DYLTKPFALT ELAARLFAVI
RRIHGFTLNN LSIHGFLLQL QDYKVSFNEV PLSLTKKEFD IFQYLVLNKN RVITRLQLTE
HIWGDILEIN SDSNFIDVHV RNLRKKLDKH TSIDWFETVR NVGYRINE
|
|---|
| |