Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3269 |
Symbol | |
ID | 4072681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3871577 |
End bp | 3872980 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985290 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_592344 |
Protein GI | 94970296 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.382263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGTAC AACAAGCGAG CACTGAGGCG AACCTCCTGA ATTTGCTGAT CGTGGACGAC GAACGAGTGG TGCGGGAGGG CTGCCGCGAT GTGGCACAAA CTCTCGGCTT CTCAACTTTC ACCGCGGAGA ATGCGGAACA GGCCTACAAG ATCCTCGACA GCACCAGTGT CGATGTCATC CTGCTCGATC TGCGCCTGCC CGGCATTGGC GGGCTCGAAG CCTTGCGCCA GATCAAGCAG CGCCGTCCTG AAACCATTGT CATCGTGGTG ACTGGATATG CCACCGTGCA GTCCGCGGTG CAGGCGATGA AACACGGCGC ATTCGACTAC GTGACCAAGC CGTTCAACAT GGACGAATTG CGCATCCTTC TCGACCGCGT CACCGGTCAC CTGAAATTGA CCACCGAGAA CCGCATGCTG CGCGAGCAGG TAAAGGCACG ACACGGATTC GGCGGCATGG TTGGCCGTGC GCCCGAAATG GAACGCCTTT ATCGCATCAT CACCAAAGCC GCGAACAGCA CCCATCCCGT CTTGATCATG GGCGAGAGCG GTACCGGCAA GGAAGTGGTA GCGCGCGCCG TGCACTACAC CGGTTGCTAC AAAGACAAAC CGTTCATCCC CGTGGATTGC GGCTCGCTGG TGCCGACGCT GATCGAGAGC GAACTCTTCG GTTACGTCAA AGGTGCCTTC ACCGGGGCGC AGCATTCCAA GCAAGGGCTG CTTGCGATGG CAGACGGCGG TACGGTCTTC CTCGACGAAA TCGGCGAACT GCCCATCGAC CTGCAATCGA AGCTGCTTCG CGCGCTCCAG GAAAAAGAGA TTCGTCCGGT GGGTGGAACT CGCGCCGTGC CGATCAACGT CCGTATCCTC GCCGCTACCA ACCGCGATCT CGAACAGGCC GTCCAGCAAG GCACCTTCCG CCGCGACCTC TACTTCCGTC TTAACGTGCT CACGCTTCGC ATTCCTCCAC TCCGTGACCG CAAACAGGAC ATCCCGCTTC TTGTCGGGCA TTTCCTGGAG CGGACGGAAC GCGCCACCGG CTTCCAGCGC AACATCAGCG ACGAAGCCCT CAAACTCATG CTCACCTACG ACTGGCCCGG AAACGTGCGC GAGCTCGAGC ATTGTCTCGA TCGTGCGTGC GCGCTCACCA GCGGGCCGAC CATCAACACT CTCGATCTTC CGACAACGAT CCAGAACTGG CATGTCCAGA CGCAAACGGT CCTGGCGCCG CAAGCGCCGG CAGCGCCAAC CAATGGCATC GTGCCTATTG CGGAGATGGA GAAGCAAGCC ATACTCGAGG CCATCGAACG GCTGCACGGC GACAAGCTCG AAGCCGCCCG TCTGCTCGGC ATCGGCAAAA CCACGTTGTA TCGAAAACTG AAGGAATACG GCGCCGCAAT CTAG
|
Protein sequence | MTVQQASTEA NLLNLLIVDD ERVVREGCRD VAQTLGFSTF TAENAEQAYK ILDSTSVDVI LLDLRLPGIG GLEALRQIKQ RRPETIVIVV TGYATVQSAV QAMKHGAFDY VTKPFNMDEL RILLDRVTGH LKLTTENRML REQVKARHGF GGMVGRAPEM ERLYRIITKA ANSTHPVLIM GESGTGKEVV ARAVHYTGCY KDKPFIPVDC GSLVPTLIES ELFGYVKGAF TGAQHSKQGL LAMADGGTVF LDEIGELPID LQSKLLRALQ EKEIRPVGGT RAVPINVRIL AATNRDLEQA VQQGTFRRDL YFRLNVLTLR IPPLRDRKQD IPLLVGHFLE RTERATGFQR NISDEALKLM LTYDWPGNVR ELEHCLDRAC ALTSGPTINT LDLPTTIQNW HVQTQTVLAP QAPAAPTNGI VPIAEMEKQA ILEAIERLHG DKLEAARLLG IGKTTLYRKL KEYGAAI
|
| |