| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0451 |
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| Symbol | |
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| ID | 5745988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 482085 |
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| End bp | 482777 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641295514 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001561482 |
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| Protein GI | 160895900 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTGT TGGTCGTTGA AGACGAGAAC AAGACGGCGG ATTACGTCCG CCAAGGTCTC
ATGGAGGCAG GGTTCGTCGT GGATCTGGCG CGTAACGGAT TGGACGGACA CCACTTGGCC
ATGAGCGAGA CCTACGATTT GGTGGTCTTG GATGTCATGC TGCCGGATGT CGATGGCTGG
CGCATCGTGC GTTCGCTGCG AGATGCTGGC AAACAAGTCC CTGTGCTATT TCTAACCGCA
CGTGGCAGCG TAGATGACCG CGTCAAGGGG TTGGAACTGG GGGCAGACGA CTATCTCGTC
AAGCCGTTCG CGTTCTCGGA ATTGCTGGCG CGGGTGCGGA CGCTGCTGCG ACGCGGAAGC
GCTCCGAGCC AGCCTGATCG CATCCAAGTT GCCGATTTGG TGCTGGACTT GCCGCGCCGA
CGTGCAACGC GCGCTGGTCA GCGCATCAAT CTCACCAGCA AGGAGTTCGC GTTGCTCGAA
CTGCTGGCAC GCCGACAGGG TGAAGTTCTG CCGCGTTCGT TGATTGCGTC TCAGGTATGG
GACATGAATT TCGACAGCGA CAGCAACGTC ATTGATGTGG CCATCCGTCG TCTGCGCGCA
AAGATCGACG ATGCGTTCAA TCCAAAGCTC ATCCACACTG TACGTGGCAT GGGATACACG
CTCGATGCGC CTGATGATGA CCTCGCGCCA TAA
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| Protein sequence | MKLLVVEDEN KTADYVRQGL MEAGFVVDLA RNGLDGHHLA MSETYDLVVL DVMLPDVDGW
RIVRSLRDAG KQVPVLFLTA RGSVDDRVKG LELGADDYLV KPFAFSELLA RVRTLLRRGS
APSQPDRIQV ADLVLDLPRR RATRAGQRIN LTSKEFALLE LLARRQGEVL PRSLIASQVW
DMNFDSDSNV IDVAIRRLRA KIDDAFNPKL IHTVRGMGYT LDAPDDDLAP
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