Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0516 |
Symbol | |
ID | 5833125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 560545 |
End bp | 561288 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641366293 |
Product | response regulator receiver |
Protein accession | YP_001638002 |
Protein GI | 163849959 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.62167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCACA TCGATCACGT CCTGATCGTC GACGACGACC GAGAAATCCG CGACTTGCTG TCGAACTACC TCAGGAAGAA CGGCCTTCGC GTGACGCTGG CCGCAGACGG GCGGCAGATG CGCGCGTTCC TCGACGCCGA CCGGGTCGAT CTCGTCGTGC TCGATGTCAT GATGCCGGGC GATGACGGCC TCGTCCTATG CCGGGAGCTT CGCTCGGGCA GGCACAAGGC CACCCCAGTC CTGATGCTGA CCGCGCGCAG CGACGAGACG GACCGGATCG TCGGCTTGGA GATGGGTGCC GATGACTATC TCGTAAAACC TTTCGCGGCC CGAGAACTCC TCGCCCGGAT CAAGGCCGTG CTTCGCCGTA CCCGAATGCT GCCACCCAAC CTCCAGGTGA CCGAGGCGGG CCGGCTTCTT GCCTTCGGGG CGTGGCAGCT CGACACCACC ACCCGTCACC TGATCGACGC AACGGGAACG GTTGTCCCCC TCAGCGGCGC AGAGTACCGG CTACTGCGCG TGCTGCTCGA TCACCCGCAG CGGGTCCTGT CGCGCGACCA GTTGCTCAAC CTGACGCAGG GCCGTGATGC CGAACTGTTC GACCGGTCCA TCGACCTGCT CGTCAGCCGC CTGCGGCAGC GGCTGAAGGA CGATGCCCGC GAGCCCTCCT ATATCAAGAC GGTGCGGAGC GAGGGCTATG TCTTCGCCAT GCCCATTACC ATCGCGCAGG CGCGCGAGGG ATGA
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Protein sequence | MNHIDHVLIV DDDREIRDLL SNYLRKNGLR VTLAADGRQM RAFLDADRVD LVVLDVMMPG DDGLVLCREL RSGRHKATPV LMLTARSDET DRIVGLEMGA DDYLVKPFAA RELLARIKAV LRRTRMLPPN LQVTEAGRLL AFGAWQLDTT TRHLIDATGT VVPLSGAEYR LLRVLLDHPQ RVLSRDQLLN LTQGRDAELF DRSIDLLVSR LRQRLKDDAR EPSYIKTVRS EGYVFAMPIT IAQAREG
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