| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0090 |
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| Symbol | |
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| ID | 8412933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 98683 |
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| End bp | 99363 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645021657 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003179117 |
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| Protein GI | 257783900 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAGATCC TAGTGGTAGA AGACGAAAAA GAACTTCTCG CCTCCATTGG AGAGGGTCTT
GAGCTTGATG GCTATTACGT TGATCTTGTC GACAACGGCA CTCAGGCTCT TGAGATGGCT
CAGCTTGAGC AATATGACCT CATCTTGCTT GACCTTAATC TTCCTGGCAT TGATGGTCTG
GATTTACTGC GTACGCTTAG ATCGGAGCAC TCAGAGACTA AGGTATTGAT TCTTTCTGCG
CGTTCATCAG TGTCTGATCG TATTGTTGGA CTGGATGCGG GTGCTGATGA CTATCTAATT
AAGCCTTTTG CGTTTGGCGA GCTAGAAGCA CGTATTAGGA CGCTTTTGCG TCGTGAGTAT
ATTCACGGAG AAGCTTCGTT GACATTAGGA GAACTTCGAT TTGATACTAC GGCTCGACAA
GTTTTTGTTG GAGATGCTCA GGTCAACCTT ACCAAGAAAG AACTTGCGAT TTTGGAGTAT
TTGATGCGAA ATGCCGGGGC GGTTGTAAGC AGTGAAGAGT TGATGGCTCA TGCATGGGAC
AGCAACGTGG ATTTATTTAG TAATTCCGTG CGTGTTCACA TTTTCTCTAT TAGAAAAAAG
TTGCGAGAAG CTCTTGGATA TGACCCAATT TCCAACAAAG TAGGAGAGGG TTATTGCTTT
AAGAAGGATA GCGATGATTA A
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| Protein sequence | MKILVVEDEK ELLASIGEGL ELDGYYVDLV DNGTQALEMA QLEQYDLILL DLNLPGIDGL
DLLRTLRSEH SETKVLILSA RSSVSDRIVG LDAGADDYLI KPFAFGELEA RIRTLLRREY
IHGEASLTLG ELRFDTTARQ VFVGDAQVNL TKKELAILEY LMRNAGAVVS SEELMAHAWD
SNVDLFSNSV RVHIFSIRKK LREALGYDPI SNKVGEGYCF KKDSDD
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