| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2806 |
|---|
| Symbol | |
|---|
| ID | 4458871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3457684 |
|---|
| End bp | 3459036 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639703580 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_846919 |
|---|
| Protein GI | 116750232 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGAA GACTGAAGGT ACTTGTCGTC GACGATGAGA AGATTGTGCG CGAATCTCTC
GTGGAATGGT TCAGGAAGTC GGGCTATGAA GCGGATTCGG CGGATGGGGG GCGAAGTGCC
CTGGAGATGG TCGCCGGGAA GGACTACGAT TTGGTATTCC TCGACATCAA GATGCCCGAT
GTGAGCGGCT TCGAAGTCCT CGACCGCATT AAGGCGGACT GCCCGTACAC CCTGGTGGTG
ATGATCACGG CTTACGGGTC GGTGGAAACC GCGGTTGACG CCATGAAACG CGGAGCTTCC
GATTATCTCA TGAAGCCTTT CGACCCCGAC GAATTGTGCT GTCATCTGGA AAGACTCCTG
CAGCAGAAGA AAATCGTCGA CGAAAACGCC ATGCTGCGCG AACACATATC GAGCGGCATG
CACTGCCGGG AGTTGATCGG CGTGTCGAAT TGCATGCAGC AATTGTTTGC ACTGATCGAA
CAGGTGGCAC AAGTCGATTC CCCTATTCTG CTGCGGGGCG AAACCGGAAC GGGAAAGGAA
ATGGTGGCAA AGGCCATCCA TGCGATGAGC GAACGCCGGG GGGGGCCCTT TGTCCCGATA
AACTGCGGGG CTTTCGCGGA GACGCTTCTT GAGAGCGAAC TGTTCGGTCA CGAAAGCCGT
GCGTTCACCG GGGCCGGAAG AGCCAAGAAG GGACGTTTGG AGATGGCCTC CGGAGGGACC
CTTTTTCTCG ATGAGGTCGG AGAAATCCCG TTGAAAATGC AGATCGATCT TCTGCGTGTC
CTTGAGGAAA AAGCCTTTAC TCGTGTAGGG GGAATATCGG AAATCTCGGT TGACTTTCGC
CTGATCTGCG CCACCCACAA GGACCTGGCA ATGGAAATCG AGCGCGGCGC CTTCAGACAG
GACTTCTATT ACAGGCTCAA CGTGATCGAA GTGGAAATCC CGCCCCTCCA CGCCAGAATC
GATGACATTC CCGTATTGGC GCAATGCTTC CTGGAGCGTA TCGGCAAGGA AACCAACAAG
CCGGTTGTCG GCATTCGGCA GCAGGGGATC GAATTTCTCA AGAGCTATCC GTGGCCGGGG
AATGTTCGAG AGCTCGAAAA CGCCATAGAA CGTGCGGTGG TACTGGCAAA AGAGCGCTAC
CTGACCAGGG ATGATTTCGC ATTTCTTTGT CGGTCTCCCG CCCAGCCGTT CCCCCAATCC
TTGAGAGAAA ACGAGAAGCA GCACCTTGAA CGTATCCTGA GCTTCTGTGG ATGGAACATT
TCCAAGGCTG CGGCAATCCT GGAAATCAGC AGGGTTACTC TGCACAGCAA GATAAGGAAA
TTCGACATTC GTCCTCCGGC AGGTCAGGGC TGA
|
|---|
| Protein sequence | MTGRLKVLVV DDEKIVRESL VEWFRKSGYE ADSADGGRSA LEMVAGKDYD LVFLDIKMPD
VSGFEVLDRI KADCPYTLVV MITAYGSVET AVDAMKRGAS DYLMKPFDPD ELCCHLERLL
QQKKIVDENA MLREHISSGM HCRELIGVSN CMQQLFALIE QVAQVDSPIL LRGETGTGKE
MVAKAIHAMS ERRGGPFVPI NCGAFAETLL ESELFGHESR AFTGAGRAKK GRLEMASGGT
LFLDEVGEIP LKMQIDLLRV LEEKAFTRVG GISEISVDFR LICATHKDLA MEIERGAFRQ
DFYYRLNVIE VEIPPLHARI DDIPVLAQCF LERIGKETNK PVVGIRQQGI EFLKSYPWPG
NVRELENAIE RAVVLAKERY LTRDDFAFLC RSPAQPFPQS LRENEKQHLE RILSFCGWNI
SKAAAILEIS RVTLHSKIRK FDIRPPAGQG
|
|---|
| |