More than 300 homologs were found in PanDaTox collection
for query gene Xcel_0239 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  100 
 
 
230 aa  447  1e-125  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  57.53 
 
 
221 aa  229  3e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  53.57 
 
 
218 aa  219  3e-56  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  53.95 
 
 
228 aa  216  2e-55  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  57.41 
 
 
217 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  56.02 
 
 
221 aa  215  5e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  54.3 
 
 
230 aa  215  5.9999999999999996e-55  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  52.49 
 
 
221 aa  214  8e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  53.91 
 
 
229 aa  214  9.999999999999999e-55  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  53.88 
 
 
220 aa  212  2.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.39 
 
 
226 aa  212  4.9999999999999996e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  54.3 
 
 
230 aa  211  9e-54  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  57.21 
 
 
215 aa  210  1e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  52.49 
 
 
222 aa  210  1e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  52.7 
 
 
227 aa  210  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  53.12 
 
 
224 aa  210  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  56.5 
 
 
225 aa  209  2e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  53.21 
 
 
225 aa  208  7e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  52.68 
 
 
227 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  52.04 
 
 
225 aa  206  3e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  50.68 
 
 
225 aa  205  5e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52.51 
 
 
225 aa  204  7e-52  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  49.33 
 
 
226 aa  204  1e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  47.11 
 
 
250 aa  203  2e-51  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.68 
 
 
239 aa  203  2e-51  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  52.07 
 
 
239 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  49.55 
 
 
230 aa  201  6e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  51.11 
 
 
225 aa  201  9e-51  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  51.6 
 
 
224 aa  201  9.999999999999999e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  52.97 
 
 
227 aa  200  9.999999999999999e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  50 
 
 
234 aa  200  9.999999999999999e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  49.32 
 
 
226 aa  200  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  51.6 
 
 
226 aa  199  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  52.73 
 
 
220 aa  200  1.9999999999999998e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  50.43 
 
 
225 aa  199  3e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  49.33 
 
 
233 aa  199  3.9999999999999996e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  53.42 
 
 
220 aa  199  3.9999999999999996e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  50 
 
 
218 aa  198  5e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  51.13 
 
 
222 aa  198  6e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  54.34 
 
 
215 aa  198  6e-50  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  49.12 
 
 
228 aa  198  6e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  50.9 
 
 
224 aa  197  7.999999999999999e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  49.78 
 
 
221 aa  197  1.0000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  50.22 
 
 
241 aa  197  1.0000000000000001e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  50.22 
 
 
222 aa  197  1.0000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_014151  Cfla_3337  two component transcriptional regulator, LuxR family  48.44 
 
 
254 aa  195  4.0000000000000005e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0952095  normal  0.130531 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  54.84 
 
 
217 aa  195  5.000000000000001e-49  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.09 
 
 
225 aa  195  6e-49  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  49.54 
 
 
213 aa  195  6e-49  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  49.78 
 
 
234 aa  194  7e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  51.6 
 
 
220 aa  194  8.000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  49.33 
 
 
221 aa  194  9e-49  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.42 
 
 
261 aa  194  1e-48  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  49.77 
 
 
214 aa  194  1e-48  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  47.27 
 
 
221 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  49.32 
 
 
218 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  48.6 
 
 
214 aa  192  3e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47.3 
 
 
218 aa  192  3e-48  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.64 
 
 
229 aa  192  4e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  49.36 
 
 
241 aa  192  4e-48  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  49.33 
 
 
226 aa  191  6e-48  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  49.11 
 
 
226 aa  191  6e-48  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
226 aa  191  7e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  48.88 
 
 
216 aa  191  8e-48  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  47.16 
 
 
230 aa  190  1e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  47.96 
 
 
223 aa  191  1e-47  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  48.65 
 
 
228 aa  191  1e-47  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  48.61 
 
 
219 aa  191  1e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  48.66 
 
 
241 aa  189  2.9999999999999997e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  46.61 
 
 
224 aa  189  2.9999999999999997e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  48.23 
 
 
230 aa  189  4e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  49.55 
 
 
220 aa  189  4e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  49.32 
 
 
217 aa  188  5e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  49.78 
 
 
225 aa  188  5e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  49.55 
 
 
228 aa  188  7e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  47.47 
 
 
234 aa  187  9e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  48.26 
 
 
234 aa  187  9e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  48.42 
 
 
220 aa  187  9e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  47.73 
 
 
219 aa  187  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  48.36 
 
 
213 aa  187  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  49.55 
 
 
218 aa  186  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  48.47 
 
 
247 aa  186  2e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  48.86 
 
 
216 aa  187  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  48.43 
 
 
225 aa  187  2e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  46.79 
 
 
219 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  47.47 
 
 
219 aa  186  3e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  46.36 
 
 
215 aa  186  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  45.87 
 
 
228 aa  186  4e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  48.39 
 
 
219 aa  186  4e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  47.66 
 
 
235 aa  185  4e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  49.53 
 
 
215 aa  186  4e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  46.08 
 
 
219 aa  185  5e-46  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  46.38 
 
 
231 aa  184  8e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  49.32 
 
 
220 aa  184  8e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  48.64 
 
 
220 aa  184  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  49.3 
 
 
219 aa  184  1.0000000000000001e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  47.77 
 
 
224 aa  184  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.43 
 
 
258 aa  184  1.0000000000000001e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  44.3 
 
 
233 aa  184  1.0000000000000001e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  48.15 
 
 
216 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
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