More than 300 homologs were found in PanDaTox collection
for query gene Ndas_4504 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  100 
 
 
281 aa  541  1e-153  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  75.1 
 
 
308 aa  371  1e-102  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  54.89 
 
 
288 aa  278  7e-74  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  61.63 
 
 
253 aa  274  1.0000000000000001e-72  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  37.27 
 
 
268 aa  142  8e-33  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  35.75 
 
 
279 aa  137  2e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
281 aa  136  4e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  31.98 
 
 
258 aa  135  7.000000000000001e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
268 aa  134  1.9999999999999998e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
273 aa  134  1.9999999999999998e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  34.82 
 
 
251 aa  132  3.9999999999999996e-30  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  36.95 
 
 
278 aa  132  5e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  31.45 
 
 
273 aa  132  6.999999999999999e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  34.68 
 
 
250 aa  131  1.0000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  34.68 
 
 
250 aa  131  1.0000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  34.38 
 
 
250 aa  131  1.0000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  34.68 
 
 
250 aa  131  1.0000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  34.38 
 
 
251 aa  131  1.0000000000000001e-29  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  34.38 
 
 
250 aa  130  2.0000000000000002e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  34.23 
 
 
250 aa  130  2.0000000000000002e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
283 aa  130  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  35.91 
 
 
272 aa  130  3e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
246 aa  130  3e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
251 aa  130  3e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  30.61 
 
 
250 aa  129  8.000000000000001e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
281 aa  127  1.0000000000000001e-28  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
268 aa  128  1.0000000000000001e-28  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
272 aa  127  1.0000000000000001e-28  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  37.11 
 
 
261 aa  127  2.0000000000000002e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  32.17 
 
 
298 aa  127  2.0000000000000002e-28  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  32.59 
 
 
250 aa  127  2.0000000000000002e-28  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_013946  Mrub_1076  ABC transporter-like protein  36.77 
 
 
488 aa  127  3e-28  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.276573 
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  37.18 
 
 
252 aa  127  3e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  34.71 
 
 
288 aa  126  3e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
289 aa  126  4.0000000000000003e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
249 aa  126  4.0000000000000003e-28  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
286 aa  125  5e-28  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
254 aa  125  5e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
257 aa  125  6e-28  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
303 aa  124  2e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
286 aa  124  2e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  30.13 
 
 
259 aa  123  3e-27  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
272 aa  123  3e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  32.51 
 
 
288 aa  122  4e-27  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  27.5 
 
 
253 aa  121  1.9999999999999998e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
329 aa  120  3.9999999999999996e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4527  binding-protein-dependent transport systems inner membrane component  45.78 
 
 
253 aa  119  6e-26  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  32.82 
 
 
251 aa  119  7e-26  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_002947  PP_3210  ABC transporter, permease protein  35.87 
 
 
267 aa  117  9.999999999999999e-26  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
254 aa  118  9.999999999999999e-26  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_010501  PputW619_2588  binding-protein-dependent transport systems inner membrane component  35.87 
 
 
267 aa  118  9.999999999999999e-26  Pseudomonas putida W619  Bacteria  normal  normal  0.417353 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
280 aa  117  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
285 aa  117  3e-25  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
362 aa  116  3e-25  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  28.63 
 
 
265 aa  116  3.9999999999999997e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0259  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
453 aa  116  5e-25  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  29.73 
 
 
249 aa  116  5e-25  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0333  binding-protein dependent transport system inner membrane protein  37.05 
 
 
278 aa  115  6e-25  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  32.2 
 
 
325 aa  115  6e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  28 
 
 
257 aa  115  7.999999999999999e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  31.05 
 
 
375 aa  115  7.999999999999999e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  28 
 
 
257 aa  115  7.999999999999999e-25  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  29.05 
 
 
265 aa  115  8.999999999999998e-25  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  29.05 
 
 
265 aa  115  8.999999999999998e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
264 aa  115  8.999999999999998e-25  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  29.24 
 
 
257 aa  115  1.0000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  29.24 
 
 
257 aa  115  1.0000000000000001e-24  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
375 aa  115  1.0000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  35.75 
 
 
253 aa  115  1.0000000000000001e-24  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  28 
 
 
255 aa  115  1.0000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1095  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
255 aa  114  1.0000000000000001e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  32.94 
 
 
265 aa  115  1.0000000000000001e-24  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  32.75 
 
 
259 aa  114  2.0000000000000002e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  25.81 
 
 
256 aa  114  2.0000000000000002e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0111  ABC transporter related  35.02 
 
 
493 aa  114  2.0000000000000002e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1260  binding-protein-dependent transport systems inner membrane component  38.57 
 
 
252 aa  114  2.0000000000000002e-24  Caulobacter sp. K31  Bacteria  normal  0.21476  normal  0.0147088 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
282 aa  114  2.0000000000000002e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
264 aa  114  2.0000000000000002e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
264 aa  114  2.0000000000000002e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  27.6 
 
 
255 aa  113  3e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  30.68 
 
 
316 aa  113  3e-24  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  36.51 
 
 
306 aa  113  3e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  30 
 
 
254 aa  113  3e-24  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  27.42 
 
 
260 aa  112  5e-24  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  31.28 
 
 
284 aa  112  5e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  32 
 
 
256 aa  112  7.000000000000001e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
259 aa  112  7.000000000000001e-24  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
256 aa  112  7.000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
263 aa  112  7.000000000000001e-24  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  35.87 
 
 
249 aa  112  7.000000000000001e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_011369  Rleg2_1676  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
287 aa  112  1.0000000000000001e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00381914  normal 
 
 
-
 
NC_009428  Rsph17025_1464  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
287 aa  111  1.0000000000000001e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  27.6 
 
 
257 aa  111  1.0000000000000001e-23  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0427  binding-protein-dependent transport systems inner membrane component  39.82 
 
 
279 aa  111  1.0000000000000001e-23  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
277 aa  111  1.0000000000000001e-23  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
322 aa  111  1.0000000000000001e-23  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_007494  RSP_3166  ABC transporter, inner membrane subunit  30.71 
 
 
281 aa  111  2.0000000000000002e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3904  binding-protein-dependent transport systems inner membrane component  29.88 
 
 
281 aa  110  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  32.79 
 
 
262 aa  110  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  32.94 
 
 
256 aa  110  3e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>