More than 300 homologs were found in PanDaTox collection
for query gene EcHS_A3002 on replicon NC_009800
Organism: Escherichia coli HS



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009800  EcHS_A3002  LuxR family transcriptional regulator  100 
 
 		 210 aa  434  1e-121  Escherichia coli HS  Bacteria  decreased coverage  0.000000000000242381  n/a   
 
 
-
 
NC_010468  EcolC_0859  two component LuxR family transcriptional regulator  100 
 
 		 210 aa  434  1e-121  Escherichia coli ATCC 8739  Bacteria  normal  0.883984  normal  1 
 
 
-
 
NC_011353  ECH74115_4126  transcriptional regulator, LuxR family  99.05 
 
 		 210 aa  432  1e-120  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  hitchhiker  0.000353041 
 
 
-
 
NC_009801  EcE24377A_3175  LuxR family transcriptional regulator  100 
 
 		 148 aa  307  9e-83  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  32.13 
 
 		 218 aa  104  1e-21  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  29.02 
 
 		 229 aa  100  2e-20  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  32.39 
 
 		 213 aa  100  2e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  30.32 
 
 		 223 aa  99  5e-20  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010465  YPK_3919  two component LuxR family transcriptional regulator  34.47 
 
 		 210 aa  98.6  6e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  34.47 
 
 		 210 aa  98.6  6e-20  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal  1 
 
 
-
 
NC_009052  Sbal_1943  two component LuxR family transcriptional regulator  30.29 
 
 		 214 aa  98.6  6e-20  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  34.47 
 
 		 210 aa  98.6  6e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_2246  two component LuxR family transcriptional regulator  30.43 
 
 		 214 aa  97.8  1e-19  Shewanella baltica OS195  Bacteria  normal  0.0703025  hitchhiker  0.00413313 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  34.12 
 
 		 212 aa  95.9  4e-19  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  32.24 
 
 		 233 aa  95.5  5e-19  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  32.86 
 
 		 208 aa  95.5  6e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_011205  SeD_A1950  hypothetical protein  32.06 
 
 		 212 aa  94.4  1e-18  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.0094858 
 
 
-
 
NC_011083  SeHA_C1526  two-component response regulator EsrB  32.06 
 
 		 212 aa  94.4  1e-18  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.577557  hitchhiker  0.00169027 
 
 
-
 
NC_011094  SeSA_A1489  EsrB  32.06 
 
 		 212 aa  94.4  1e-18  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.121116  normal  0.320198 
 
 
-
 
NC_011149  SeAg_B1780  EsrB  32.06 
 
 		 212 aa  94  1e-18  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.111024  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  29.91 
 
 		 218 aa  94.4  1e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  29.91 
 
 		 218 aa  94.4  1e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A1504  hypothetical protein  32.06 
 
 		 212 aa  94.4  1e-18  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  hitchhiker  0.000000918459 
 
 
-
 
NC_010571  Oter_3186  two component LuxR family transcriptional regulator  31.87 
 
 		 215 aa  93.6  2e-18  Opitutus terrae PB90-1  Bacteria  normal  0.0678517  normal  1 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  30.77 
 
 		 206 aa  93.2  2e-18  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  31.46 
 
 		 214 aa  93.2  3e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  29.44 
 
 		 218 aa  92.4  4e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  33.79 
 
 		 218 aa  92.8  4e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  30.7 
 
 		 216 aa  90.9  1e-17  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_3490  two component LuxR family transcriptional regulator  30.5 
 
 		 210 aa  90.1  2e-17  Serratia proteamaculans 568  Bacteria  normal  0.0559776  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.33 
 
 		 212 aa  89.4  3e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0851  two component transcriptional regulator, LuxR family  29.44 
 
 		 232 aa  88.6  6e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  31.78 
 
 		 232 aa  87.8  1e-16  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  31.02 
 
 		 220 aa  87.4  1e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  29.27 
 
 		 206 aa  87  2e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  29.61 
 
 		 214 aa  87  2e-16  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  29.52 
 
 		 223 aa  86.7  2e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  28.64 
 
 		 221 aa  87  2e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  28.5 
 
 		 213 aa  86.7  2e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  29.61 
 
 		 214 aa  86.3  3e-16  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  29.19 
 
 		 213 aa  86.3  3e-16  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_1266  two-component response regulator  30.41 
 
 		 227 aa  86.3  3e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.847879  normal  0.913346 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  29.03 
 
 		 217 aa  85.9  4e-16  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  30.58 
 
 		 219 aa  85.9  4e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  28.84 
 
 		 212 aa  85.1  7e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  30.62 
 
 		 209 aa  85.1  7e-16  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  28.11 
 
 		 219 aa  85.1  7e-16  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_004578  PSPTO_4151  DNA-binding response regulator, LuxR family  28.37 
 
 		 208 aa  84.3  0.000000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.35782  n/a   
 
 
-
 
NC_007005  Psyr_3890  LuxR response regulator receiver  28.37 
 
 		 208 aa  84.3  0.000000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.330128 
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  28.44 
 
 		 210 aa  84.3  0.000000000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  27.62 
 
 		 209 aa  84.7  0.000000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  28.44 
 
 		 210 aa  84.3  0.000000000000001  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.147525 
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  31.28 
 
 		 209 aa  84  0.000000000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_010571  Oter_3239  two component LuxR family transcriptional regulator  32.86 
 
 		 274 aa  83.2  0.000000000000002  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_1620  two component LuxR family transcriptional regulator  29.94 
 
 		 206 aa  84  0.000000000000002  Pseudomonas putida W619  Bacteria  normal  1  normal  0.0222153 
 
 
-
 
NC_007005  Psyr_2114  LuxR response regulator receiver  29.05 
 
 		 212 aa  83.2  0.000000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.22828 
 
 
-
 
NC_010159  YpAngola_A2794  nitrate/nitrite response regulator protein NarP  31.28 
 
 		 209 aa  83.6  0.000000000000002  Yersinia pestis Angola  Bacteria  normal  1  normal  0.0858473 
 
 
-
 
NC_010465  YPK_1384  two component LuxR family transcriptional regulator  31.28 
 
 		 209 aa  83.6  0.000000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  29.82 
 
 		 215 aa  83.6  0.000000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  26.98 
 
 		 220 aa  83.2  0.000000000000003  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  28.44 
 
 		 214 aa  83.2  0.000000000000003  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  29.9 
 
 		 218 aa  82.8  0.000000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_2101  LuxR family DNA-binding response regulator  29.83 
 
 		 207 aa  82.4  0.000000000000004  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.00862279  normal  0.220235 
 
 
-
 
NC_009512  Pput_3638  two component LuxR family transcriptional regulator  29.83 
 
 		 205 aa  82.4  0.000000000000004  Pseudomonas putida F1  Bacteria  normal  1  normal  0.489861 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  28.7 
 
 		 217 aa  82.4  0.000000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  29.11 
 
 		 211 aa  82.8  0.000000000000004  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  40.94 
 
 		 216 aa  82.4  0.000000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  27.7 
 
 		 242 aa  82.4  0.000000000000005  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  30.84 
 
 		 232 aa  82  0.000000000000005  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_3523  two component LuxR family transcriptional regulator  30.77 
 
 		 224 aa  82.4  0.000000000000005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  41.73 
 
 		 216 aa  82  0.000000000000006  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  25.96 
 
 		 212 aa  81.6  0.000000000000007  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  30.43 
 
 		 213 aa  81.6  0.000000000000007  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  27.4 
 
 		 214 aa  82  0.000000000000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_007958  RPD_1558  response regulator receiver  29.77 
 
 		 221 aa  81.6  0.000000000000008  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  27.57 
 
 		 212 aa  81.6  0.000000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  26.89 
 
 		 228 aa  81.3  0.000000000000009  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_1643  two component LuxR family transcriptional regulator  30.11 
 
 		 205 aa  81.3  0.000000000000009  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.003137  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  28.37 
 
 		 207 aa  81.3  0.000000000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  29.17 
 
 		 232 aa  80.9  0.00000000000001  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_010725  Mpop_4860  two component transcriptional regulator, LuxR family  27.91 
 
 		 236 aa  80.9  0.00000000000001  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.142587 
 
 
-
 
NC_006274  BCZK1321  response regulator  30.95 
 
 		 210 aa  80.9  0.00000000000001  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  29.63 
 
 		 232 aa  80.9  0.00000000000001  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  26.92 
 
 		 221 aa  81.3  0.00000000000001  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B2381  transcriptional regulator NarP  30.1 
 
 		 215 aa  80.9  0.00000000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A2472  transcriptional regulator NarP  30.1 
 
 		 215 aa  80.9  0.00000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_1119  two component LuxR family transcriptional regulator  26.57 
 
 		 208 aa  80.9  0.00000000000001  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  29.21 
 
 		 209 aa  80.9  0.00000000000001  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  27.7 
 
 		 215 aa  80.5  0.00000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  28.5 
 
 		 235 aa  80.5  0.00000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_011149  SeAg_B0595  transcriptional regulator FimZ  30.92 
 
 		 210 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.447967  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  30.84 
 
 		 232 aa  80.5  0.00000000000002  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009727  CBUD_1093  response regulator  36.67 
 
 		 217 aa  80.1  0.00000000000002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.120555  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0986  LuxR family transcriptional regulator  36.67 
 
 		 217 aa  80.1  0.00000000000002  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  29.63 
 
 		 232 aa  80.5  0.00000000000002  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  26.61 
 
 		 228 aa  80.5  0.00000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  27.1 
 
 		 222 aa  80.1  0.00000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_011205  SeD_A0598  transcriptional regulator FimZ  30.92 
 
 		 210 aa  80.1  0.00000000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  0.110504 
 
 
-
 
NC_010322  PputGB1_4322  two component LuxR family transcriptional regulator  26.21 
 
 		 207 aa  80.1  0.00000000000002  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  29.52 
 
 		 210 aa  79.7  0.00000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
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