Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0859 |
Symbol | |
ID | 6065122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 925377 |
End bp | 926009 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641600262 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001723855 |
Protein GI | 170018901 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.883984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAA TTAAAATTGT AGTTTCAGAT CAGCAGCCGT TTATGATTGA TGGGATAATT GGATTTCTCG GACATTATCC TGATTTATAT GAGGTTGTTG GGGGCTATAA AGATCTGAAG AAAGCTATAG CGGAGTGTAA CAAATCTACA GCCCAAATAT TTATTTTAGG AGAATTTGCA GGTGGAATGA TGGGGTCCGA ACTCGTAAAA TGGGTTAAAT CGCATAAGAT AGATGCTCAT ATTATTACAT TTGTAGCAAA GATGCCGTAT ATTGATTCAA TAAAATTGCT TGAAGCAGGT GCGAAAGGAT GCGTATGGAA AACCAGTCAC CCGGCGAAAC TAAATCGTGC TATTGATTCG ATTAGTAATG GTTACACTTA TTTTGATAGT GTACATATGG ATTGTGAAAA AATATCTTCC AGGTATTCCT CTGATAATCA ACTTACAAAT CGTGAGTCAG AAATATTACA ACTCATAGCT GATGGTAAAA CAAACAAAGA AATCGCTAAT TTCTTGCAGT TAAGCAGGAA AACAGTCGAA ACTCATAGAC TCAATATCAT GAAGAAATTA GATGTTCACA GTGGTATCGA GTTGATCAAA ACAGCTTTAC GTATGGGTGT TTGCACTATA TAA
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Protein sequence | MGKIKIVVSD QQPFMIDGII GFLGHYPDLY EVVGGYKDLK KAIAECNKST AQIFILGEFA GGMMGSELVK WVKSHKIDAH IITFVAKMPY IDSIKLLEAG AKGCVWKTSH PAKLNRAIDS ISNGYTYFDS VHMDCEKISS RYSSDNQLTN RESEILQLIA DGKTNKEIAN FLQLSRKTVE THRLNIMKKL DVHSGIELIK TALRMGVCTI
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