More than 300 homologs were found in PanDaTox collection
for query gene Caci_6963 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  100 
 
 
225 aa  440  1e-122  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  63.84 
 
 
241 aa  264  1e-69  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  61.26 
 
 
226 aa  239  3e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  56.36 
 
 
235 aa  234  6e-61  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  56.11 
 
 
221 aa  228  4e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  53.39 
 
 
222 aa  227  1e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  56.11 
 
 
228 aa  220  2e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  55.36 
 
 
232 aa  219  2e-56  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  51.54 
 
 
230 aa  218  4e-56  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  52.94 
 
 
224 aa  218  5e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  53.74 
 
 
226 aa  218  6e-56  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  53.42 
 
 
223 aa  218  6e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  53.18 
 
 
225 aa  217  1e-55  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  53.33 
 
 
227 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  55.36 
 
 
247 aa  217  1e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  53.15 
 
 
218 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  51.34 
 
 
224 aa  216  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  53.36 
 
 
226 aa  216  3e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  52.27 
 
 
218 aa  215  4e-55  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.1 
 
 
226 aa  214  8e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  53.18 
 
 
215 aa  214  8e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  52.47 
 
 
226 aa  214  9e-55  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  53.36 
 
 
222 aa  214  1e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  54.34 
 
 
216 aa  213  2e-54  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  53.85 
 
 
226 aa  212  4e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.05 
 
 
223 aa  211  6e-54  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  50 
 
 
225 aa  211  8e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  50.22 
 
 
234 aa  211  1e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  51.35 
 
 
224 aa  211  1e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  51.57 
 
 
221 aa  210  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  49.08 
 
 
230 aa  209  2e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.85 
 
 
234 aa  209  3e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  51.34 
 
 
220 aa  207  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  51.82 
 
 
225 aa  207  8e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.6 
 
 
229 aa  207  9e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  51.83 
 
 
213 aa  207  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.23 
 
 
222 aa  206  2e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  53.39 
 
 
221 aa  206  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  55.91 
 
 
224 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  52.25 
 
 
221 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  53.6 
 
 
214 aa  206  3e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  50.68 
 
 
230 aa  206  3e-52  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  52.04 
 
 
222 aa  206  3e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  54.13 
 
 
221 aa  205  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  53.15 
 
 
226 aa  205  6e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  46.96 
 
 
248 aa  204  8e-52  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  52.63 
 
 
244 aa  204  8e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  50.91 
 
 
214 aa  204  8e-52  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  52.94 
 
 
228 aa  204  9e-52  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  53.39 
 
 
217 aa  204  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  50.23 
 
 
220 aa  203  1e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  52.73 
 
 
220 aa  204  1e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  46.41 
 
 
250 aa  204  1e-51  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  49.55 
 
 
221 aa  203  2e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  50.22 
 
 
217 aa  203  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  7.94288e-08  unclonable  3.32591e-08 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  48.87 
 
 
220 aa  203  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  53.39 
 
 
220 aa  202  2e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  51.8 
 
 
224 aa  202  3e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  52.51 
 
 
220 aa  202  3e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  51.57 
 
 
229 aa  202  3e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  52.51 
 
 
215 aa  202  3e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.18 
 
 
230 aa  202  3e-51  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.49 
 
 
226 aa  202  4e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  50.68 
 
 
224 aa  201  6e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  50.45 
 
 
230 aa  201  8e-51  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  47.95 
 
 
218 aa  201  8e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  49.33 
 
 
225 aa  201  8e-51  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  50 
 
 
223 aa  200  1e-50  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.9 
 
 
261 aa  199  2e-50  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  50.88 
 
 
223 aa  200  2e-50  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  3.86408e-05  hitchhiker  0.000570848 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  50.23 
 
 
234 aa  200  2e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  48.21 
 
 
224 aa  200  2e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  51.14 
 
 
230 aa  199  3e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  52.47 
 
 
215 aa  199  3e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  49.78 
 
 
217 aa  198  4e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  50 
 
 
236 aa  199  4e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  48.87 
 
 
233 aa  199  4e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  49.1 
 
 
227 aa  199  4e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  48.2 
 
 
220 aa  198  5e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  50.89 
 
 
225 aa  198  5e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  53.36 
 
 
215 aa  198  6e-50  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.66 
 
 
222 aa  198  6e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  48.65 
 
 
239 aa  198  7e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  50.68 
 
 
214 aa  197  8e-50  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  50.68 
 
 
225 aa  197  9e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  51.11 
 
 
219 aa  197  1e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  49.77 
 
 
221 aa  197  1e-49  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  49.32 
 
 
225 aa  196  2e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  48 
 
 
218 aa  196  2e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  52.29 
 
 
232 aa  196  2e-49  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  50.88 
 
 
242 aa  196  2e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  1.13212e-10 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  50.9 
 
 
226 aa  196  2e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  49.56 
 
 
233 aa  196  2e-49  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  48.9 
 
 
220 aa  196  3e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  48.86 
 
 
222 aa  195  4e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.4 
 
 
239 aa  195  5e-49  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  52.02 
 
 
302 aa  195  5e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  49.55 
 
 
241 aa  195  6e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  49.55 
 
 
215 aa  195  6e-49  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  50 
 
 
223 aa  194  7e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
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