More than 300 homologs were found in PanDaTox collection
for query gene VIBHAR_05401 on replicon NC_009784
Organism: Vibrio harveyi ATCC BAA-1116



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009784  VIBHAR_05401  hypothetical protein  100 
 
 
409 aa  825    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001464  ABC-type transport system involved in lipoprotein release permease component  82.06 
 
 
409 aa  678    Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1429  hypothetical protein  59.61 
 
 
411 aa  471  1e-132  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3197  hypothetical protein  57.65 
 
 
427 aa  458  9.999999999999999e-129  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2660  hypothetical protein  58.02 
 
 
410 aa  458  1e-127  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2534  protein of unknown function DUF214  31.67 
 
 
406 aa  216  8e-55  Rhodothermus marinus DSM 4252  Bacteria  normal  0.261611  n/a   
 
 
-
 
NC_007520  Tcr_0434  hypothetical protein  27.43 
 
 
425 aa  155  1e-36  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2498  hypothetical protein  29.31 
 
 
380 aa  147  3e-34  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00553555  normal 
 
 
-
 
NC_010682  Rpic_1663  protein of unknown function DUF214  28.11 
 
 
535 aa  146  8.000000000000001e-34  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5303  protein of unknown function DUF214  28.11 
 
 
830 aa  145  1e-33  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3196  hypothetical protein  26.96 
 
 
410 aa  139  1e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001465  ABC-type transport system involved in lipoprotein release permease component  27.33 
 
 
411 aa  138  2e-31  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2373  ABC-type transport system, permease component  28.96 
 
 
407 aa  134  1.9999999999999998e-30  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000351897  n/a   
 
 
-
 
NC_007520  Tcr_0435  hypothetical protein  27.29 
 
 
431 aa  134  3.9999999999999996e-30  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.131989  n/a   
 
 
-
 
NC_009784  VIBHAR_05402  hypothetical protein  26.93 
 
 
411 aa  129  1.0000000000000001e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_2374  ABC-type transport system, permease component  26.17 
 
 
409 aa  128  2.0000000000000002e-28  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000200206  n/a   
 
 
-
 
NC_003910  CPS_5041  putative ABC transporter, permease protein  25.83 
 
 
441 aa  127  3e-28  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1430  hypothetical protein  26.13 
 
 
428 aa  127  4.0000000000000003e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2903  hypothetical protein  28 
 
 
410 aa  125  1e-27  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.110934 
 
 
-
 
NC_003910  CPS_5042  ABC transporter, permease protein, putative  28.57 
 
 
415 aa  125  2e-27  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2659  hypothetical protein  26.24 
 
 
421 aa  119  9.999999999999999e-26  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2901  hypothetical protein  26.92 
 
 
411 aa  105  2e-21  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.0934048 
 
 
-
 
NC_008554  Sfum_2497  hypothetical protein  24.48 
 
 
422 aa  103  6e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.536779  normal 
 
 
-
 
NC_013501  Rmar_2535  protein of unknown function DUF214  24.53 
 
 
412 aa  100  6e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_23260  ABC-type transport system, involved in lipoprotein release, permease component  26.89 
 
 
419 aa  99  1e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_23240  ABC-type transport system, involved in lipoprotein release, permease component  22.95 
 
 
415 aa  98.2  2e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_23230  ABC-type transport system, involved in lipoprotein release, permease component  25 
 
 
419 aa  97.8  3e-19  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000130781  n/a   
 
 
-
 
NC_008553  Mthe_0918  hypothetical protein  22.58 
 
 
389 aa  94  4e-18  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009901  Spea_1547  LolC/E family lipoprotein releasing system, transmembrane protein  23.46 
 
 
417 aa  94  5e-18  Shewanella pealeana ATCC 700345  Bacteria  normal  0.124688  n/a   
 
 
-
 
NC_007643  Rru_A1578  LolC/E family lipoprotein releasing system, transmembrane protein  23.35 
 
 
417 aa  90.9  4e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0665062  n/a   
 
 
-
 
NC_009092  Shew_1634  LolC/E family lipoprotein releasing system, transmembrane protein  24.54 
 
 
417 aa  89.4  1e-16  Shewanella loihica PV-4  Bacteria  normal  0.0870078  normal  0.876319 
 
 
-
 
NC_010682  Rpic_1691  protein of unknown function DUF214  25.81 
 
 
295 aa  86.7  6e-16  Ralstonia pickettii 12J  Bacteria  normal  0.132145  normal 
 
 
-
 
NC_008782  Ajs_3421  LolC/E family lipoprotein releasing system, transmembrane protein  24.71 
 
 
417 aa  84.7  0.000000000000002  Acidovorax sp. JS42  Bacteria  normal  0.176273  normal 
 
 
-
 
NC_007520  Tcr_1172  LolC/E family lipoprotein releasing system, transmembrane protein  22.66 
 
 
416 aa  84.3  0.000000000000003  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0830739  n/a   
 
 
-
 
NC_011992  Dtpsy_2755  lipoprotein releasing system, transmembrane protein, LolC/E family  24.62 
 
 
417 aa  84.3  0.000000000000004  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1763  putative ABC transporter, integral membrane protein  27.27 
 
 
422 aa  84  0.000000000000005  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.412712 
 
 
-
 
NC_008752  Aave_3700  LolC/E family lipoprotein releasing system, transmembrane protein  23.77 
 
 
417 aa  83.6  0.000000000000005  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.8164 
 
 
-
 
NC_010506  Swoo_1815  LolC/E family lipoprotein releasing system, transmembrane protein  21.93 
 
 
418 aa  83.6  0.000000000000006  Shewanella woodyi ATCC 51908  Bacteria  normal  0.138304  normal  0.103936 
 
 
-
 
NC_013456  VEA_003990  lipoprotein releasing system transmembrane protein LolE  24.18 
 
 
414 aa  82.8  0.00000000000001  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0758  lipoprotein releasing system, transmembrane protein, LolC/E family  20.06 
 
 
420 aa  82.8  0.00000000000001  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.00020569  n/a   
 
 
-
 
NC_011662  Tmz1t_1986  lipoprotein releasing system, transmembrane protein, LolC/E family  24.68 
 
 
418 aa  82.4  0.00000000000001  Thauera sp. MZ1T  Bacteria  normal  0.914701  n/a   
 
 
-
 
NC_007614  Nmul_A2509  LolC/E family lipoprotein releasing system, transmembrane protein  22.51 
 
 
414 aa  82.4  0.00000000000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.418191  n/a   
 
 
-
 
NC_007947  Mfla_2095  LolC/E family lipoprotein releasing system, transmembrane protein  23.69 
 
 
421 aa  82.4  0.00000000000001  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.00459774  normal 
 
 
-
 
NC_007511  Bcep18194_B0507  LolC/E family lipoprotein releasing system, transmembrane protein  22.4 
 
 
427 aa  82  0.00000000000002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000978  ABC-type transport system involved in lipoprotein release permease component  25.14 
 
 
422 aa  82  0.00000000000002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5401  LolC/E family lipoprotein releasing system, transmembrane protein  24.64 
 
 
423 aa  80.9  0.00000000000004  Delftia acidovorans SPH-1  Bacteria  normal  0.117898  normal 
 
 
-
 
NC_009784  VIBHAR_07028  efflux ABC transporter ATP-binding/permease  25.07 
 
 
422 aa  80.5  0.00000000000005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012560  Avin_29500  hypothetical protein  25.07 
 
 
416 aa  80.5  0.00000000000006  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0386  hypothetical protein  23.53 
 
 
422 aa  80.5  0.00000000000006  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.574376  n/a   
 
 
-
 
NC_013422  Hneap_0224  lipoprotein releasing system, transmembrane protein, LolC/E family  20.32 
 
 
415 aa  80.1  0.00000000000007  Halothiobacillus neapolitanus c2  Bacteria  normal  0.0374875  n/a   
 
 
-
 
NC_007912  Sde_1809  lipoprotein releasing system transmembrane protein LolE  20.7 
 
 
414 aa  80.1  0.00000000000007  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2748  putative lipoprotein releasing system transmembrane  22.99 
 
 
418 aa  80.1  0.00000000000007  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1210  lipoprotein releasing system, transmembrane protein, LolC/E family  23.01 
 
 
418 aa  79.7  0.00000000000008  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2829  LolC/E family lipoprotein releasing system, transmembrane protein  22.66 
 
 
419 aa  79  0.0000000000001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.417689  normal  0.0183937 
 
 
-
 
NC_007794  Saro_1765  LolC/E family lipoprotein releasing system, transmembrane protein  22.05 
 
 
413 aa  79  0.0000000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.157209  n/a   
 
 
-
 
NC_012856  Rpic12D_1056  lipoprotein releasing system, transmembrane protein, LolC/E family  23.19 
 
 
416 aa  78.2  0.0000000000003  Ralstonia pickettii 12D  Bacteria  normal  0.530836  normal  0.504254 
 
 
-
 
NC_007298  Daro_2836  LolC/E family lipoprotein releasing system, transmembrane protein  23.05 
 
 
415 aa  78.2  0.0000000000003  Dechloromonas aromatica RCB  Bacteria  normal  0.620052  normal 
 
 
-
 
NC_011899  Hore_19660  ABC-type transport system, involved in lipoprotein release, permease component  24.45 
 
 
400 aa  78.2  0.0000000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1621  protein of unknown function DUF214  25.58 
 
 
404 aa  78.2  0.0000000000003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1372  lipoprotein releasing system, transmembrane protein, LolC/E family  21.51 
 
 
434 aa  77.4  0.0000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4227  hypothetical protein  22.52 
 
 
408 aa  77  0.0000000000005  Xanthobacter autotrophicus Py2  Bacteria  normal  0.405326  normal  0.650749 
 
 
-
 
NC_007514  Cag_0371  putative ABC transporter, integral membrane protein  23.83 
 
 
422 aa  77  0.0000000000005  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.258896  n/a   
 
 
-
 
NC_010682  Rpic_0960  lipoprotein releasing system, transmembrane protein, LolC/E family  23.19 
 
 
416 aa  77  0.0000000000005  Ralstonia pickettii 12J  Bacteria  normal  0.100135  normal  0.0249332 
 
 
-
 
NC_009783  VIBHAR_01532  outer membrane-specific lipoprotein transporter subunit LolE  24.35 
 
 
407 aa  77  0.0000000000006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007798  NSE_0137  putative permease  23.7 
 
 
407 aa  76.3  0.0000000000009  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1446  LolC/E family lipoprotein releasing system, transmembrane protein  22.05 
 
 
417 aa  75.9  0.000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal 
 
 
-
 
NC_008609  Ppro_3015  LolC/E family lipoprotein releasing system, transmembrane protein  21.4 
 
 
420 aa  75.9  0.000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7413  ABC efflux pump, inner membrane subunit  24.06 
 
 
405 aa  75.9  0.000000000001  Burkholderia sp. 383  Bacteria  normal  0.155043  normal 
 
 
-
 
NC_007760  Adeh_3411  ABC transporter, inner membrane subunit  22.86 
 
 
405 aa  75.9  0.000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.108471  n/a   
 
 
-
 
NC_009524  PsycPRwf_1740  LolC/E family lipoprotein releasing system, transmembrane protein  20.59 
 
 
411 aa  75.9  0.000000000001  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.170655 
 
 
-
 
NC_011353  ECH74115_1293  efflux ABC transporter, permease protein  27.45 
 
 
436 aa  75.9  0.000000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.353692 
 
 
-
 
NC_007404  Tbd_1761  LolC/E family lipoprotein releasing system, transmembrane protein  21.85 
 
 
414 aa  75.5  0.000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.293206  normal 
 
 
-
 
NC_011761  AFE_0481  lipoprotein releasing system transmembrane protein LolC  20.36 
 
 
414 aa  75.5  0.000000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0317  protein of unknown function DUF214  22.92 
 
 
422 aa  75.5  0.000000000002  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0641  lipoprotein releasing system, transmembrane protein, LolC/E family  20.36 
 
 
414 aa  75.5  0.000000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.256103  normal 
 
 
-
 
NC_011899  Hore_23270  ABC-type transport system, involved in lipoprotein release, permease component  25.33 
 
 
411 aa  74.7  0.000000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1199  lipoprotein releasing system, transmembrane protein, LolC/E family  20.99 
 
 
416 aa  74.7  0.000000000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.132324 
 
 
-
 
NC_011369  Rleg2_1280  lipoprotein releasing system, transmembrane protein, LolC/E family  22.78 
 
 
434 aa  74.3  0.000000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0107812  normal  0.317103 
 
 
-
 
NC_009511  Swit_2346  LolC/E family lipoprotein releasing system, transmembrane protein  22.81 
 
 
416 aa  73.9  0.000000000005  Sphingomonas wittichii RW1  Bacteria  normal  0.323587  normal 
 
 
-
 
NC_007908  Rfer_3232  LolC/E family lipoprotein releasing system, transmembrane protein  24.36 
 
 
418 aa  73.6  0.000000000006  Rhodoferax ferrireducens T118  Bacteria  normal  0.215903  n/a   
 
 
-
 
NC_009456  VC0395_0383  hypothetical protein  24.86 
 
 
419 aa  73.6  0.000000000006  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1577  protein of unknown function DUF214  23.89 
 
 
401 aa  73.6  0.000000000007  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.340093  n/a   
 
 
-
 
NC_010084  Bmul_1156  LolC/E family lipoprotein releasing system, transmembrane protein  21.34 
 
 
417 aa  72.8  0.00000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.342008  normal  0.0203303 
 
 
-
 
NC_010681  Bphyt_2567  lipoprotein releasing system, transmembrane protein, LolC/E family  22.53 
 
 
417 aa  72.4  0.00000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.178921  normal  0.0571791 
 
 
-
 
NC_008639  Cpha266_1098  hypothetical protein  24.51 
 
 
429 aa  72.4  0.00000000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0142755  n/a   
 
 
-
 
NC_007510  Bcep18194_A5420  LolC/E family lipoprotein releasing system, transmembrane protein  21.34 
 
 
417 aa  72.4  0.00000000001  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2598  LolC/E family lipoprotein releasing system, transmembrane protein  21.65 
 
 
426 aa  72.8  0.00000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.258492  normal  0.437082 
 
 
-
 
NC_011060  Ppha_0421  protein of unknown function DUF214  23.65 
 
 
422 aa  72.8  0.00000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.850184  n/a   
 
 
-
 
NC_007951  Bxe_A1566  ABC lipoprotein efflux pump, inner membrane subunit  22.05 
 
 
417 aa  72.8  0.00000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.764315  normal  0.414868 
 
 
-
 
NC_007964  Nham_2196  LolC/E family lipoprotein releasing system, transmembrane protein  21.88 
 
 
426 aa  72.4  0.00000000001  Nitrobacter hamburgensis X14  Bacteria  decreased coverage  0.00714902  n/a   
 
 
-
 
NC_008786  Veis_2542  hypothetical protein  23.15 
 
 
441 aa  72  0.00000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.429279  normal  0.740963 
 
 
-
 
NC_007799  ECH_0127  LolC/E family lipoprotein releasing system transmembrane protein  20.36 
 
 
410 aa  71.6  0.00000000002  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2864  LolC/E family lipoprotein releasing system, transmembrane protein  21.65 
 
 
422 aa  72  0.00000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.998701  normal  0.300269 
 
 
-
 
NC_007973  Rmet_1040  LolC/E family lipoprotein releasing system, transmembrane protein  22.18 
 
 
416 aa  71.6  0.00000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.678846 
 
 
-
 
NC_008048  Sala_1175  LolC/E family lipoprotein releasing system, transmembrane protein  19.94 
 
 
416 aa  72  0.00000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.433535  normal 
 
 
-
 
NC_010644  Emin_1310  hypothetical protein  20.31 
 
 
409 aa  72  0.00000000002  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3423  lipoprotein releasing system, transmembrane protein, LolC/E family  21.46 
 
 
416 aa  71.6  0.00000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007347  Reut_A1076  LolC/E family lipoprotein releasing system, transmembrane protein  21.16 
 
 
416 aa  71.6  0.00000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.0609031  n/a   
 
 
-
 
NC_011894  Mnod_4145  lipoprotein releasing system, transmembrane protein, LolC/E family  25.19 
 
 
428 aa  71.2  0.00000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2154  LolC/E family lipoprotein releasing system, transmembrane protein  21.23 
 
 
416 aa  71.2  0.00000000003  Shewanella putrefaciens CN-32  Bacteria  normal  0.97636  n/a   
 
 
-
 
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