| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2659 |
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| Symbol | |
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| ID | 4923311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3132800 |
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| End bp | 3134065 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640164254 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094784 |
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| Protein GI | 127513587 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGG ATAATTCTGG CTGGCATCCG CCCATGCTGG CCCTTTTGGC CTGGCGCAAT
CTGTGGCGTA ACCGCCTGCG CACCAGCATC ATGGTGTGCG CCATGGTGTT TGGCCTGGTG
GGCGTGGTGG TGATGTTAGG CTTCATGACA GGCATGTACG CCAACATGAT AGATAACGCC
GTCGCCTGGC AGACCAGCCA CCTGCAGGTG CATAACAAGG ATTATCTGCT CGATCCGGAT
ATCAATAGCC GGATACGCGC GCCCGAGCCT GTGCTGGCTG AGCTTAGTCA GATCCCTGAG
GTGCAAGGTG TCTCGGCGCG CTTTGTGGTG CAGGGCATGC TGGCCTCGCC CCGGGCGAGT
CGCGGCATTC GCATCAATGG CGTTGACCCC GCCGCCGAGG CCAGGGTGAC GCCCATCGCC
GACAATATCA CCCAGGGGGA CTGGCTCGAG GCCGGTGGAC GGCATCCCAT AGTGATCTCG
GAGAAGACGG CGAGCCGCCT CAAGTTAAGG CTGGGTTCCA AGGTGGTGCT TACCTTCAGC
AACGCCGACA AGGCGGTTAG CGGGGCGGCG TTTCGGGTGG CGGGCCTCTA TCGCTCCCCC
TCCAGCACCT TCGATGAGGC CAATGCCTAT GTGCGCCGCG CCGATCTGAC CGCGTTGGCG
GGGCTGGATG GCGTGCATGA GATCGCCATT CGCCTGACAA AAAGCGATAG TCTGGACAAT
AGCCGCGCCA AGGCGCTTGC CAAGATACTA TTGAGCGTGC TGTCGCCCCA GGACAGGGTG
CGCGACTGGC AAGAGATCCA GCCGATGCTG GCCACCATTA TCGCTCAGAT GGACACCAGC
AATGCGGTGA TTCTGCTGAT CTTCATCTCG GCGCTGGGGC TGGGGATTGC CAACATCATG
TTGATGGCGG TGTTTGAGCG CACGCGGGAG TTTGGCGTGC TGATGGCCAT CGGCATGGTG
AAGCGCAAGA TAATGGGGCT GATCCTGCTG GAGTCTTTGC TGCTTGGGCT GACGGGGGCG
CTACTTGGTC TTATGCTGAG CGTGTTGGTG ATAGCGCTGC TGGCAAACAC AGGCATCCCC
CTTGGTAACA TGGCCGATGG ACTCGGCGCC TTCGGCGTAT CGACCACCCT CTATCCCCAG
GTCACCCTCG GTCAGTATCT CTCGACCTTG GCGATGGTGG TGATTGTTAG CCTGCTGGCG
GCCCTCTATC CGGCGCGGCA GATCGTCAAG CAGCGTCCGG TAGACGCCAT GTCGCAGAAG
CATTAG
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| Protein sequence | MTKDNSGWHP PMLALLAWRN LWRNRLRTSI MVCAMVFGLV GVVVMLGFMT GMYANMIDNA
VAWQTSHLQV HNKDYLLDPD INSRIRAPEP VLAELSQIPE VQGVSARFVV QGMLASPRAS
RGIRINGVDP AAEARVTPIA DNITQGDWLE AGGRHPIVIS EKTASRLKLR LGSKVVLTFS
NADKAVSGAA FRVAGLYRSP SSTFDEANAY VRRADLTALA GLDGVHEIAI RLTKSDSLDN
SRAKALAKIL LSVLSPQDRV RDWQEIQPML ATIIAQMDTS NAVILLIFIS ALGLGIANIM
LMAVFERTRE FGVLMAIGMV KRKIMGLILL ESLLLGLTGA LLGLMLSVLV IALLANTGIP
LGNMADGLGA FGVSTTLYPQ VTLGQYLSTL AMVVIVSLLA ALYPARQIVK QRPVDAMSQK
H
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