Gene Hore_23240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_23240 
Symbol 
ID7314207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp2542912 
End bp2544159 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content44% 
IMG OID643612776 
ProductABC-type transport system, involved in lipoprotein release, permease component 
Protein accessionYP_002510064 
Protein GI220933156 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCTGG TTAAACTGGC TTTTAAGAAC CTGACCCGCC ACCGGAAAAG AACCCTGATT 
ACAGCAGCTG TAATTGCCCT GGCAGTGGTT ATTTACCTGA TGACCGATTC CCTCCTTATA 
GGGATGGTAG ATAAATCTTT TGAAAATGTT ATCGATTTTG AGTCAGGCCA CATTCAGATT 
GTTAATCAAA ATTACTGGGA GGAGAGGGAG GACCTGCCCC TTAAAAATTT AATCAGGCCT 
GACAGGGAAT TATTAACTTT TCTCCAAAAG GTAGATGGTT TAAAGGGTTT GACCCCGGTG 
TTGACCTTCA GTGCTACCCT GAATAACGGT ATTGAAGAGA TACCGGTAGT GGCCCAGGGA 
ATCGATCCTC AAAGTTATTC ACAGGTTTTA AGGGCAGGGG AGTATCTTGT TGAGGGTGAA 
TTTTTGACAG GAAATAAGTC CACCGCGGTC ATGGGTAAAA CCCTGGCCAA GTTGATGGAT 
TTAAAAACAG GGGACTATAT AACTCTGGTA ATTAAAAGTA AAGAAGGAAC CTTTAATACA 
ATAGATGTTC AGATATCTGG TCTGGTTGAT TCACCCAACC CCAGTATCAA TGAAAATATT 
GTTTTTGTTC CCCTTGAAAT AGCCCGGCAG GCTTTAAATG TCAGGGGCAT GGTCAGTCAG 
ATAATTATCA GGGTAGAAGA CAGGATAAGA GCCGTCGAGA CAGCGAGGTT GTTATCAGAT 
GATTTGCAAG AAGCCGGATC TTCTTTAAGG GCCTTCTCCT GGCGTAAGTC GGCCGAGTAC 
ATTGTAGCCC TGAACAAAGC CGAGAGGGTT GAAACCCAGA TGATATTAGG TATTATTCTG 
TTAATAGCAG CTATAGGAAT AATCAATTTC GTTGTCCTGG CTGCCCTGGA AAGAATGGAA 
GAAATCGGGA TGATGAAGGC CCTTGGACTG AAACAGTGGG AGATAGTTAT CGTTTTTGTT 
ATGGAAGCTG TTGGAGTCAG CCTTATTGGA GGTATCATTG GATGCCTTGT GGGTGGAGCG 
GTCGTTGCCT ATTTAGTTTT TTATGGAGTG GATATATTTT CCCTGGGAGG GGAAGATGCC 
ATCAGTTCCA TGGGTATCCC TGTCCTGGGA CGGATATACG GGGGCTTTAA TCCCGGTTCC 
TTCATCTTTG TTTTTAGTTA TAGTGTTATT GTATCCCTGC TGGTCAGTAT TTTTCCAGCA 
CGATGGGCCG CCCGAAAGGA TCCGGTTAAG GCTATCTATC ACCGTTAG
 
Protein sequence
MFLVKLAFKN LTRHRKRTLI TAAVIALAVV IYLMTDSLLI GMVDKSFENV IDFESGHIQI 
VNQNYWEERE DLPLKNLIRP DRELLTFLQK VDGLKGLTPV LTFSATLNNG IEEIPVVAQG 
IDPQSYSQVL RAGEYLVEGE FLTGNKSTAV MGKTLAKLMD LKTGDYITLV IKSKEGTFNT 
IDVQISGLVD SPNPSINENI VFVPLEIARQ ALNVRGMVSQ IIIRVEDRIR AVETARLLSD 
DLQEAGSSLR AFSWRKSAEY IVALNKAERV ETQMILGIIL LIAAIGIINF VVLAALERME 
EIGMMKALGL KQWEIVIVFV MEAVGVSLIG GIIGCLVGGA VVAYLVFYGV DIFSLGGEDA 
ISSMGIPVLG RIYGGFNPGS FIFVFSYSVI VSLLVSIFPA RWAARKDPVK AIYHR