| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1765 |
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| Symbol | |
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| ID | 3916340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1861258 |
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| End bp | 1862499 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640444506 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_497039 |
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| Protein GI | 87199782 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.157209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCCTGT CTCCGTTCGA ATGGACCATC GCCAAGCGCT ACATGCTGCC GGGGCGAGGG
GAGGCTTTCA TCGCACTCGT CGCCGGTATC AGCCTCGTGG CGGTCATGCT GGGCGTTGCC
GCGCTCGTCA TCGTGATGAG CGTGATGAAC GGCTTCCGCG CCGAACTGCT CGACAAGATC
GTCGGCCTCA ACGGCCACGC GATCATCCAG GCCTATGGCG GCCGGCTCGA CAACTGGCAG
GACATCCTCA AGCGCGTCCA GCAGACGCCC GACGTGACCC ACGCCTCGCC GCTGATCGAG
CAGCCGCTGC TCGCCAGCTT CAACGGCCGA GTCGAGGCGA TCCTCGTGCG TGGCAATACG
GCGGAGGACA TCAAGCGGCT CGAGGACAAG CGCGTCGACG GTGTCATCGG CTCGCTGCGC
CCCGGCTCGG GCAATGTCGC CCTAGGGTCG CGCCTTGCCG AAAACCTTGG CGCGCGCGTG
GGCGACAGCA TTACCATCAT CAACCCGCAA GGCAGGTCGA CCCCGTTCGG CACTGTCCCG
CGCGAGATCG CCTATACCGT TTCAGCGATC TTCGAGGTCG GCGTCTACGA CTACGACCAG
GCCTATGTCG TCATGCCCAT CTCCGATGCG CAGACCCTGC TGTTGACGGG CGACACTATC
GGCATGATCG AGGTGACGAC GACCAACGCC GACACGGTGA TGGATACCCT GGGGCCGCTC
AAGAAGGAGC TGGAAGGCCA GGCCGTCGTC ACGGACTGGA AGACCATCAA CGCCAGCCTG
TTCGAGGCGC TCGCGGTGGA ACGCGTGGCG ATGTTCATCG TGCTTTCGAT CATCGTGCTG
GTAGCGGTGT TCAACATCCT GTCATCGCTG ATCATGCTGG TACGCGCCAA GACCCGCGAC
ATCGCGATTC TGCGCACGAT GGGGGCGACG CGAAAGAGCC TGCTCAAGAT CTTCGTGACC
ATCGGTTTCG TGATCGGGGC GCTGGGCACC CTATCGGGGC TCGCGCTCGG CTTCGTGTTC
CTGTTCTTCC GCCAGCCCAT CGTCAACGCG ATCCAGTATC TCACCGGGCA GAACCTGTGG
GACCCCTCGA TCCGTTTCCT CACCGAACTG CCGAGCCGCT CCGATCCCGT GGAGATCACC
ACGATCTGCC TGATGGCGCT GCTGTTCAGC TTCCTTGCGA CTCTTTATCC GGCGCTCAAG
GCGGCGAGCA CGGACCCCGT TCAGGTGCTG CGTTATGAGT GA
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| Protein sequence | MILSPFEWTI AKRYMLPGRG EAFIALVAGI SLVAVMLGVA ALVIVMSVMN GFRAELLDKI
VGLNGHAIIQ AYGGRLDNWQ DILKRVQQTP DVTHASPLIE QPLLASFNGR VEAILVRGNT
AEDIKRLEDK RVDGVIGSLR PGSGNVALGS RLAENLGARV GDSITIINPQ GRSTPFGTVP
REIAYTVSAI FEVGVYDYDQ AYVVMPISDA QTLLLTGDTI GMIEVTTTNA DTVMDTLGPL
KKELEGQAVV TDWKTINASL FEALAVERVA MFIVLSIIVL VAVFNILSSL IMLVRAKTRD
IAILRTMGAT RKSLLKIFVT IGFVIGALGT LSGLALGFVF LFFRQPIVNA IQYLTGQNLW
DPSIRFLTEL PSRSDPVEIT TICLMALLFS FLATLYPALK AASTDPVQVL RYE
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