| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3232 |
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| Symbol | |
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| ID | 3962872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3580128 |
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| End bp | 3581384 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918051 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_524472 |
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| Protein GI | 89902001 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.215903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTCC CTTATGAACT CATTCTTGGC TGGCGCTACA CGCGCGCTGG CCGCGCGACC
CGGCGCAACG GCTTTATTTC TTTCATCTCG GGTGTGTCGA TGCTGGGCAT TGCGCTTGGT
GTGGCGGCAC TGATCATCGT GTTGAGCGTC ATGAACGGCT TTCAGAAAGA GGTGCGCGAC
CGTATGCTGA GTGTGGTCTC GCACATTGAG ATTTTTGCCC CCAACGGTGC GGCCCTGCCC
GACGCGGCAC TCACACTCAG CCAGGTGCGG GCCCATCCCC AGGTGGTTGG TGCTGCACCT
TTTATAGCTA CTCAAGCCCT GCTGGCGAGG GGCGAGGACA TGAAAGGCAC GATGGTGCGG
GGCATTGACC CAGCCCGCGA GCCCGAGGTG ACGGACCTTG CCATTGATCT CAAAAATACC
GGCCTGAGCC GCCTGATCCC CGGCGAGTTT GGTGTTGTGC TGGGCGGCGA GCTGGCGCGA
TCTTTGGGTG TGCGTCAGGG CGACAAGGTG ACTTTGGTGG CGCCCAGTGG CCAGGTGACC
CCCGCCGGTA TCGTGCCGCG CCTCAAGCAG ATGACGGTGG TGGGCACCTT TGACTCCGGA
CATTTTGAAT ACGACTCCGC GCTGGTGCTG ATGCACATTG AAGATGCGGC GCGCATCTTC
CGCTTGGAGG GCCCCACCGG CGTGCGGGTC AAGCTGCGCG ATTTGCACCA GGCGCGCGAG
GTGGCGGCTG ACCTGGCCAA GACCTTGACG GGCGAGCTGT TGATCCGCGA CTGGACGCGC
CAGAACCGCA CCTGGTTTGC CGCCGTGCAG ATGGAAAAAC GCATGATGTT CATCATCCTC
ACGCTGATCG TGGCGGTGGC CGCTTTCAAC CTGGTCAGTA CGCTGGTGAT GACGGTCACC
GACAAGCGCG CCGACATTGC CATCCTGCGC ACGCTGGGCG CCAGCCCGCA GAGCATCATG
GGGATTTTTG TGGTGCAGGG CGCGATGGTG GGCGTGATTG GCACCTTCGC CGGCCTGGCC
CTGGGCCTGG GCGTGGCCTT CAATATCGAT GTGATCGTGC CCGCGTTGGA GCGGCTGTTC
CAGGCCAGTT TTTTGCCCAA AGACATCTAT TTGATCAGCC GCATGCCGAG CGATCCGCAG
CAGGCGGACA TCGTGCCGAT TGCCGTCATT TCCCTGGTGC TGGCTTTTCT GGCCACCCTC
TACCCGAGCT GGCGCGCCAG CCGGGTGAAC CCGGCGGAGG CACTGCGTTA TGAATAA
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| Protein sequence | MQLPYELILG WRYTRAGRAT RRNGFISFIS GVSMLGIALG VAALIIVLSV MNGFQKEVRD
RMLSVVSHIE IFAPNGAALP DAALTLSQVR AHPQVVGAAP FIATQALLAR GEDMKGTMVR
GIDPAREPEV TDLAIDLKNT GLSRLIPGEF GVVLGGELAR SLGVRQGDKV TLVAPSGQVT
PAGIVPRLKQ MTVVGTFDSG HFEYDSALVL MHIEDAARIF RLEGPTGVRV KLRDLHQARE
VAADLAKTLT GELLIRDWTR QNRTWFAAVQ MEKRMMFIIL TLIVAVAAFN LVSTLVMTVT
DKRADIAILR TLGASPQSIM GIFVVQGAMV GVIGTFAGLA LGLGVAFNID VIVPALERLF
QASFLPKDIY LISRMPSDPQ QADIVPIAVI SLVLAFLATL YPSWRASRVN PAEALRYE
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