| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2567 |
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| Symbol | |
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| ID | 6284394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2899643 |
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| End bp | 2900896 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622126 |
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| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
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| Protein accession | YP_001896186 |
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| Protein GI | 187924544 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.178921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0571791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATTTC CCTACGAATG GCAGATTGGC TGGCGCTACA CCCGCGCCGG CAAACGCACG
ACCGGTAACG GCTTCATTTC CTTCATCGCG CTCGTGTCGA TGTCGGGCAT CGCGCTCGGC
GTCGCGGCGC TGATCGTCGT GTTGTCCGTG ATGAACGGCT TTCAGAAAGA GGTGCGCGAC
CGCATGCTGT CGGTGCTCGC GCACGTGGAA ATCTTTTCGC CGACCGGCTC GATGCCCGAC
TGGCAACTCA CCGCCAAAGA GGCCCGCCAG AACAAGGAAG TGATCGGCGC GGCGCCGTAT
GTCGAAGCCC AGGCGCTGCT CACGCGCCAG GACGCGGTGA GCGGCGTGGC GCTGCGCGGC
GTCGAGCCGT CGCTGGAGCC GCAGGTGTCC GATATCGGTA AGGAGATGAA AGGCGGCAGT
CTGAACGCGC TGGTGCCGGG CGACTTCGGC ATCGTGCTGG GCGCCGACCT CGCCACCAAT
CTCGGCGTGA CGGTCAACGA CAAGATCACG CTGGTCGCGC CCGAAGGCAC CATTACGCCC
GCCGGCATGC TACCGCGGCT AAAACAGTTC ACGGTGGTGG GCATCTTCGA GTCGGGTCAC
TACGAATACG ACAGCACGCT CGCGCTGATC AACATCAAGG ACGCGCAGGC GCTGTTCCGG
CTGCCCGCGC CGACCGGCGT GCGGCTGCGC CTGACCGACA TGCAGCGCGC GCCGGAAGTC
GCGCATCAGC TTGCGCGCAC GCTGTCCGGC GATTTATACA TTCGCGACTG GACGCAGCAG
AACAAGACCT GGTTCTCGGC GGTGCAGATC GAAAAACGCA TGATGTTCAT CATCCTCACG
CTGATCATCG CGGTGGCGGC GTTCAATCTG GTGTCGTCGC TTGTGATGAC GGTGACCAAC
AAGCAGGCCG ACATCGCGAT TCTGCGCACG CTCGGCGCGC AGCCCGGTTC GATCATGAAG
ATTTTCGTGG TGCAGGGCGT GACGATCGGT TTTATCGGCA CTGCCACCGG CGTCGCGCTC
GGCTGCCTGA TCGCGTGGAG TATTCCATGG CTCGTGCCGA TGATCGAACA CCTGCTCGGC
GTGCAGTTCC TGCCGCCGTC GGTGTATTTC ATCAGCGAAC TGCCGTCCGA ACTGGTTCCG
GCCGACGTCG CGCGAATCGG CGTCATCGCC TTCGTGATGT CCGCGCTGGC CACGTTGTAC
CCGAGCTGGC GTGGTGCCAA AGTCCGTCCG GCGGAGGCAC TGCGCTATGA ATGA
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| Protein sequence | MKFPYEWQIG WRYTRAGKRT TGNGFISFIA LVSMSGIALG VAALIVVLSV MNGFQKEVRD
RMLSVLAHVE IFSPTGSMPD WQLTAKEARQ NKEVIGAAPY VEAQALLTRQ DAVSGVALRG
VEPSLEPQVS DIGKEMKGGS LNALVPGDFG IVLGADLATN LGVTVNDKIT LVAPEGTITP
AGMLPRLKQF TVVGIFESGH YEYDSTLALI NIKDAQALFR LPAPTGVRLR LTDMQRAPEV
AHQLARTLSG DLYIRDWTQQ NKTWFSAVQI EKRMMFIILT LIIAVAAFNL VSSLVMTVTN
KQADIAILRT LGAQPGSIMK IFVVQGVTIG FIGTATGVAL GCLIAWSIPW LVPMIEHLLG
VQFLPPSVYF ISELPSELVP ADVARIGVIA FVMSALATLY PSWRGAKVRP AEALRYE
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