More than 300 homologs were found in PanDaTox collection
for query gene Sfum_2497 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_2497  hypothetical protein  100 
 
 
422 aa  848    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.536779  normal 
 
 
-
 
NC_007520  Tcr_0435  hypothetical protein  31.7 
 
 
431 aa  192  8e-48  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.131989  n/a   
 
 
-
 
NC_007498  Pcar_2373  ABC-type transport system, permease component  31.82 
 
 
407 aa  182  1e-44  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000351897  n/a   
 
 
-
 
NC_012849  Rpic12D_5303  protein of unknown function DUF214  32.45 
 
 
830 aa  168  2e-40  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3196  hypothetical protein  30.33 
 
 
410 aa  161  2e-38  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2534  protein of unknown function DUF214  33.33 
 
 
406 aa  157  4e-37  Rhodothermus marinus DSM 4252  Bacteria  normal  0.261611  n/a   
 
 
-
 
NC_009092  Shew_2659  hypothetical protein  30.56 
 
 
421 aa  152  1e-35  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2374  ABC-type transport system, permease component  28.5 
 
 
409 aa  149  7e-35  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000200206  n/a   
 
 
-
 
NC_003910  CPS_5042  ABC transporter, permease protein, putative  29.36 
 
 
415 aa  147  5e-34  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0434  hypothetical protein  28.33 
 
 
425 aa  142  9.999999999999999e-33  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001465  ABC-type transport system involved in lipoprotein release permease component  26.2 
 
 
411 aa  140  4.999999999999999e-32  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1430  hypothetical protein  28.01 
 
 
428 aa  139  7.999999999999999e-32  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001464  ABC-type transport system involved in lipoprotein release permease component  27.18 
 
 
409 aa  138  2e-31  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1663  protein of unknown function DUF214  32.03 
 
 
535 aa  134  3.9999999999999996e-30  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05402  hypothetical protein  25.88 
 
 
411 aa  132  1.0000000000000001e-29  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010682  Rpic_1691  protein of unknown function DUF214  33.8 
 
 
295 aa  128  2.0000000000000002e-28  Ralstonia pickettii 12J  Bacteria  normal  0.132145  normal 
 
 
-
 
NC_009784  VIBHAR_05401  hypothetical protein  27.41 
 
 
409 aa  127  5e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2660  hypothetical protein  28.61 
 
 
410 aa  122  1.9999999999999998e-26  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2498  hypothetical protein  27.46 
 
 
380 aa  120  6e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00553555  normal 
 
 
-
 
NC_003910  CPS_5041  putative ABC transporter, permease protein  25.31 
 
 
441 aa  118  1.9999999999999998e-25  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2535  protein of unknown function DUF214  30.42 
 
 
412 aa  118  1.9999999999999998e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2901  hypothetical protein  28.91 
 
 
411 aa  111  2.0000000000000002e-23  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.0934048 
 
 
-
 
NC_010506  Swoo_1429  hypothetical protein  26.05 
 
 
411 aa  110  4.0000000000000004e-23  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2903  hypothetical protein  27.76 
 
 
410 aa  108  1e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.110934 
 
 
-
 
NC_011899  Hore_23240  ABC-type transport system, involved in lipoprotein release, permease component  25.96 
 
 
415 aa  106  1e-21  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1801  protein of unknown function DUF214  26.27 
 
 
412 aa  102  1e-20  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1365  lipoprotein releasing system, transmembrane protein, LolC/E family  25.84 
 
 
415 aa  100  4e-20  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1252  LolC/E family lipoprotein releasing system, transmembrane protein  23.95 
 
 
414 aa  99.4  1e-19  Halorhodospira halophila SL1  Bacteria  normal  0.368874  n/a   
 
 
-
 
NC_009831  Ssed_3197  hypothetical protein  27.64 
 
 
427 aa  98.6  2e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000978  ABC-type transport system involved in lipoprotein release permease component  25.12 
 
 
422 aa  96.7  7e-19  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1747  LolC/E family lipoprotein releasing system, transmembrane protein  24.88 
 
 
414 aa  95.1  2e-18  Marinobacter aquaeolei VT8  Bacteria  normal  0.726619  n/a   
 
 
-
 
NC_008340  Mlg_1440  LolC/E family lipoprotein releasing system, transmembrane protein  26.02 
 
 
415 aa  95.1  2e-18  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.141439  normal  0.211841 
 
 
-
 
NC_007509  Bcep18194_C7413  ABC efflux pump, inner membrane subunit  28.37 
 
 
405 aa  94.7  3e-18  Burkholderia sp. 383  Bacteria  normal  0.155043  normal 
 
 
-
 
NC_007355  Mbar_A3445  hypothetical protein  21.8 
 
 
389 aa  93.2  7e-18  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.000000235465  normal  0.187048 
 
 
-
 
NC_013512  Sdel_2020  protein of unknown function DUF214  23.5 
 
 
411 aa  93.6  7e-18  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.00000619382  n/a   
 
 
-
 
NC_009784  VIBHAR_07028  efflux ABC transporter ATP-binding/permease  25.06 
 
 
422 aa  93.2  8e-18  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008786  Veis_2530  hypothetical protein  23.37 
 
 
407 aa  92.8  9e-18  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0995274  normal 
 
 
-
 
NC_013456  VEA_003990  lipoprotein releasing system transmembrane protein LolE  24.88 
 
 
414 aa  92.4  1e-17  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0224  lipoprotein releasing system, transmembrane protein, LolC/E family  26.29 
 
 
415 aa  91.7  2e-17  Halothiobacillus neapolitanus c2  Bacteria  normal  0.0374875  n/a   
 
 
-
 
NC_011899  Hore_23230  ABC-type transport system, involved in lipoprotein release, permease component  24.29 
 
 
419 aa  90.9  4e-17  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000130781  n/a   
 
 
-
 
NC_007614  Nmul_A2509  LolC/E family lipoprotein releasing system, transmembrane protein  23.59 
 
 
414 aa  90.1  7e-17  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.418191  n/a   
 
 
-
 
NC_003295  RSc1117  lipoprotein releasing system transmembrane  25.7 
 
 
416 aa  89.7  9e-17  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0172186  normal  0.243011 
 
 
-
 
NC_010644  Emin_1310  hypothetical protein  23.37 
 
 
409 aa  89  1e-16  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_2584  LolC/E family lipoprotein releasing system, transmembrane protein  25.48 
 
 
417 aa  89.4  1e-16  Burkholderia pseudomallei 668  Bacteria  normal  0.297179  n/a   
 
 
-
 
NC_009076  BURPS1106A_2639  LolC/E family lipoprotein releasing system, transmembrane protein  25.48 
 
 
417 aa  89.4  1e-16  Burkholderia pseudomallei 1106a  Bacteria  normal  0.795007  n/a   
 
 
-
 
NC_007947  Mfla_2095  LolC/E family lipoprotein releasing system, transmembrane protein  24.62 
 
 
421 aa  89  1e-16  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.00459774  normal 
 
 
-
 
NC_008553  Mthe_0918  hypothetical protein  23.56 
 
 
389 aa  89.4  1e-16  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009456  VC0395_0383  hypothetical protein  27.97 
 
 
419 aa  88.2  2e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2398  LolC/E family lipoprotein releasing system, transmembrane protein  27.24 
 
 
418 aa  87.4  4e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012856  Rpic12D_1056  lipoprotein releasing system, transmembrane protein, LolC/E family  26.35 
 
 
416 aa  87.4  5e-16  Ralstonia pickettii 12D  Bacteria  normal  0.530836  normal  0.504254 
 
 
-
 
NC_008825  Mpe_A2748  putative lipoprotein releasing system transmembrane  27.49 
 
 
418 aa  87  6e-16  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1621  protein of unknown function DUF214  24.71 
 
 
404 aa  86.7  7e-16  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2201  putative lipoprotein releasing system transmembrane protein  25.24 
 
 
417 aa  86.3  9e-16  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1696  lipoprotein releasing system transmembrane protein, putative  25.24 
 
 
417 aa  86.3  9e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1474  putative lipoprotein releasing system transmembrane protein  25.24 
 
 
417 aa  86.3  9e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3117  putative lipoprotein releasing system transmembrane protein  25.24 
 
 
417 aa  86.3  9e-16  Burkholderia mallei NCTC 10229  Bacteria  normal  0.139824  n/a   
 
 
-
 
NC_007434  BURPS1710b_2718  lipoprotein releasing system transmembrane protein, putative  25.24 
 
 
417 aa  86.3  0.000000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1199  lipoprotein releasing system, transmembrane protein, LolC/E family  23.17 
 
 
416 aa  86.3  0.000000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.132324 
 
 
-
 
NC_007520  Tcr_1172  LolC/E family lipoprotein releasing system, transmembrane protein  22.98 
 
 
416 aa  85.5  0.000000000000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0830739  n/a   
 
 
-
 
NC_007651  BTH_I1887  lipoprotein releasing system transmembrane protein, putative  26 
 
 
448 aa  85.5  0.000000000000002  Burkholderia thailandensis E264  Bacteria  normal  0.358126  n/a   
 
 
-
 
NC_007912  Sde_1809  lipoprotein releasing system transmembrane protein LolE  23 
 
 
414 aa  85.1  0.000000000000002  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_1098  hypothetical protein  25.45 
 
 
429 aa  84.7  0.000000000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0142755  n/a   
 
 
-
 
NC_009783  VIBHAR_01532  outer membrane-specific lipoprotein transporter subunit LolE  22.55 
 
 
407 aa  84  0.000000000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_0837  lipoprotein releasing system, transmembrane protein, LolC/E family  22.57 
 
 
416 aa  84  0.000000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  0.0822431  n/a   
 
 
-
 
NC_010681  Bphyt_2567  lipoprotein releasing system, transmembrane protein, LolC/E family  24.43 
 
 
417 aa  84  0.000000000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  0.178921  normal  0.0571791 
 
 
-
 
NC_010682  Rpic_0960  lipoprotein releasing system, transmembrane protein, LolC/E family  25.75 
 
 
416 aa  84  0.000000000000005  Ralstonia pickettii 12J  Bacteria  normal  0.100135  normal  0.0249332 
 
 
-
 
NC_007404  Tbd_1761  LolC/E family lipoprotein releasing system, transmembrane protein  23.68 
 
 
414 aa  84  0.000000000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.293206  normal 
 
 
-
 
NC_007510  Bcep18194_A5420  LolC/E family lipoprotein releasing system, transmembrane protein  24.93 
 
 
417 aa  83.6  0.000000000000006  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_23260  ABC-type transport system, involved in lipoprotein release, permease component  22.03 
 
 
419 aa  83.6  0.000000000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1986  lipoprotein releasing system, transmembrane protein, LolC/E family  25.88 
 
 
418 aa  83.2  0.000000000000007  Thauera sp. MZ1T  Bacteria  normal  0.914701  n/a   
 
 
-
 
NC_009483  Gura_2438  hypothetical protein  26.76 
 
 
406 aa  83.2  0.000000000000008  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0758  lipoprotein releasing system, transmembrane protein, LolC/E family  22.65 
 
 
420 aa  83.2  0.000000000000009  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.00020569  n/a   
 
 
-
 
NC_010508  Bcenmc03_2132  LolC/E family lipoprotein releasing system, transmembrane protein  24.93 
 
 
417 aa  81.6  0.00000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.435353  normal  0.150883 
 
 
-
 
NC_010117  COXBURSA331_A0938  LolC/E family lipoprotein releasing system, transmembrane protein  24.63 
 
 
414 aa  82  0.00000000000002  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1468  LolC/E family lipoprotein releasing system, transmembrane protein  25.51 
 
 
420 aa  82  0.00000000000002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5963  LolC/E family lipoprotein releasing system, transmembrane protein  24.93 
 
 
417 aa  81.6  0.00000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.28938  n/a   
 
 
-
 
NC_008542  Bcen2424_2114  LolC/E family lipoprotein releasing system, transmembrane protein  24.93 
 
 
417 aa  81.6  0.00000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.08589  n/a   
 
 
-
 
NC_009727  CBUD_1046  lipoprotein releasing system transmembrane protein  24.63 
 
 
414 aa  82  0.00000000000002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_1156  LolC/E family lipoprotein releasing system, transmembrane protein  24.93 
 
 
417 aa  82  0.00000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.342008  normal  0.0203303 
 
 
-
 
NC_008576  Mmc1_1033  LolC/E family lipoprotein releasing system, transmembrane protein  23.37 
 
 
413 aa  82  0.00000000000002  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.229485 
 
 
-
 
NC_007951  Bxe_A1566  ABC lipoprotein efflux pump, inner membrane subunit  24.14 
 
 
417 aa  81.3  0.00000000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.764315  normal  0.414868 
 
 
-
 
NC_010622  Bphy_1446  LolC/E family lipoprotein releasing system, transmembrane protein  23.85 
 
 
417 aa  80.5  0.00000000000005  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal 
 
 
-
 
NC_008781  Pnap_3256  LolC/E family lipoprotein releasing system, transmembrane protein  25.83 
 
 
418 aa  80.1  0.00000000000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2024  LolC/E family lipoprotein releasing system, transmembrane protein  24.93 
 
 
417 aa  80.1  0.00000000000008  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.329575 
 
 
-
 
NC_007519  Dde_1366  LolC/E family lipoprotein releasing system, transmembrane protein  24.01 
 
 
408 aa  79.7  0.00000000000009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.217764  n/a   
 
 
-
 
NC_010513  Xfasm12_0384  lipoprotein releasing system transmembrane protein  25.25 
 
 
413 aa  79  0.0000000000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3232  LolC/E family lipoprotein releasing system, transmembrane protein  25.38 
 
 
418 aa  79  0.0000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.215903  n/a   
 
 
-
 
NC_007948  Bpro_1014  LolC/E family lipoprotein releasing system, transmembrane protein  25.16 
 
 
418 aa  79.3  0.0000000000001  Polaromonas sp. JS666  Bacteria  normal  normal  0.0682578 
 
 
-
 
NC_012918  GM21_3423  lipoprotein releasing system, transmembrane protein, LolC/E family  22.42 
 
 
416 aa  79.3  0.0000000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007614  Nmul_A0369  hypothetical protein  24.77 
 
 
403 aa  77.8  0.0000000000003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1210  lipoprotein releasing system, transmembrane protein, LolC/E family  23.93 
 
 
418 aa  77.8  0.0000000000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2669  LolC/E family lipoprotein releasing system, transmembrane protein  22.02 
 
 
415 aa  77.4  0.0000000000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0348  LolC/E family lipoprotein releasing system, transmembrane protein  25 
 
 
413 aa  77.8  0.0000000000004  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2151  LolC/E family lipoprotein releasing system, transmembrane protein  24.36 
 
 
417 aa  77.4  0.0000000000004  Burkholderia ambifaria AMMD  Bacteria  normal  0.0738534  n/a   
 
 
-
 
NC_002977  MCA2624  lipoprotein ABC transporter, permease protein LolE  24.34 
 
 
415 aa  77.4  0.0000000000005  Methylococcus capsulatus str. Bath  Bacteria  normal  0.857684  n/a   
 
 
-
 
NC_007298  Daro_2395  hypothetical protein  23.45 
 
 
404 aa  77  0.0000000000006  Dechloromonas aromatica RCB  Bacteria  normal  0.111806  normal  0.574816 
 
 
-
 
NC_007355  Mbar_A0790  putative ABC transporter permease protein  25.36 
 
 
371 aa  76.6  0.0000000000008  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.119405 
 
 
-
 
NC_007347  Reut_A1076  LolC/E family lipoprotein releasing system, transmembrane protein  26.19 
 
 
416 aa  76.3  0.0000000000009  Ralstonia eutropha JMP134  Bacteria  normal  0.0609031  n/a   
 
 
-
 
NC_007973  Rmet_1040  LolC/E family lipoprotein releasing system, transmembrane protein  24.46 
 
 
416 aa  76.3  0.0000000000009  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.678846 
 
 
-
 
NC_007912  Sde_1811  addiction module toxin, Txe/YoeB  22.05 
 
 
412 aa  75.9  0.000000000001  Saccharophagus degradans 2-40  Bacteria  normal  0.556262  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>