| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3197 |
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| Symbol | |
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| ID | 5612083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3855626 |
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| End bp | 3856909 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934135 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474929 |
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| Protein GI | 157376329 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAATCA AACTGGCTTG GCGAAATCTG TGGCGGCAGA AGCGGCGCAC CATTTTAACG
GCAATGGCGC TGGCGTTGGC ACTGCTTCTT TCTCTGTTTA TGCGAAGTAT GCAGGAGGGG
AGTTATGCCA ATAATATCGA GAACAGTGCT AAATTTTCAA CCGGGTTGAT TCAGTTACAG
CATGTTGAGT TTGCGGAGAG TCAGAGCATT GAAGATCTCC TCCCGGCAAC CGATGAATTT
ATCGCCGCCG CCCGAAAACT GGATGATGTG GAGCGAATAT TACCCAGGCT GGAGTCGTTT
GCTTTAGCGG CTGCCGGCGA TAAATCAAAA GGGGTAATGG TACTGGGGGT TATGCCAGCC
CTTGAAGATG AATACTCAAG TATCTCCGAT AAAGTGGTTG AGGGTGAGTT TATCAAGGCC
GATGACAAGT CGGTACTAGT CGGTCAGGGA CTTGCCGATT ATCTCTCTTT GACTGTGGGT
GATGAGCTAG TGCTGTATGG GCAGGGCTAT CGGGGCCAGA CCGCAGCGGG GCTCTACAAG
ATTAAAGGAA TAGTACATTT CCCCCTGCCT CAGCTGGATA ACCTGCTTAT CTATATGCCA
CTGCCATTGT CACAAACACT GTTTAGCACG GGTGAGCAGG TTTCTGCATG GGTTATCGAT
ACCAGGGAGC TGACCAAACT CGAACAGACG ATGGCCGATC TGCAGCGTGC TTATTCAGCC
ACTTTGCTAA AGAACAGCTC GCAGCACTCT TTACTGGATA GAAATGGGAA GAGTCAGGTA
AATGTACGTG ACTGGGAAGA TCTCGCTCCC GAGATGGCGC AGCAGATCGC CATGGATAAG
GCGGGAGGCA TTTTTATGAT GTATCTGCTT TATGGTGTGG TGGGTTTTGG ACTCTTTGCC
ACTATTTTAA TGATGACGCT TGAGCGTTAT CGAGAGTTCG GTGTGATGAT GGCCACCGGG
TTAGTAAGGG CCAAGTTGCT TGGTCTGGTG ATACTTGAAT CGAGCTTTAT CTCGCTACTT
GGGGTCACGA TAGGGTTGGC GCTCGGAACC CCTCTGGTGG TGTGGTTCCA TTATCACCCT
ATTGAGTTAA CCGGCGAAAC TGCCGAGATG ATGCTGGAGT TGGGCTGGGA GCCTATCCTT
CCAATGCTGT TATCACCTTG GCTGTTTATC GATCAGATTC TTATTGTGCT TGGGTTAATG
TTGCTGTGCT TACTCTATCC CCTGTGGCGG ATCTACCGTC TCGATCTGGT TACCGCGTTA
AAGGGAGGTG GCCATGTTAA TTAA
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| Protein sequence | MLIKLAWRNL WRQKRRTILT AMALALALLL SLFMRSMQEG SYANNIENSA KFSTGLIQLQ
HVEFAESQSI EDLLPATDEF IAAARKLDDV ERILPRLESF ALAAAGDKSK GVMVLGVMPA
LEDEYSSISD KVVEGEFIKA DDKSVLVGQG LADYLSLTVG DELVLYGQGY RGQTAAGLYK
IKGIVHFPLP QLDNLLIYMP LPLSQTLFST GEQVSAWVID TRELTKLEQT MADLQRAYSA
TLLKNSSQHS LLDRNGKSQV NVRDWEDLAP EMAQQIAMDK AGGIFMMYLL YGVVGFGLFA
TILMMTLERY REFGVMMATG LVRAKLLGLV ILESSFISLL GVTIGLALGT PLVVWFHYHP
IELTGETAEM MLELGWEPIL PMLLSPWLFI DQILIVLGLM LLCLLYPLWR IYRLDLVTAL
KGGGHVN
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