Gene Veis_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2542 
Symbol 
ID4692832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp2872397 
End bp2873722 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content61% 
IMG OID639850308 
Producthypothetical protein 
Protein accessionYP_997305 
Protein GI121609498 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.429279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.740963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACC TGCTCGCCTG GCTGGCCAAC CTCATCGCCG TCTACGCCCT GATCCTCATC 
GGGTGGACAA TCGTTCGCCG ACCGACTGAC CTGGCCTACG CCTTTTCCAA TCTGTTCCGG
CAAAAGCGTC GTTCGCTGGT CACGCTGAGC TCCATCGTAC TGGGCGGCGT GGCAATCTTC
CTGTTCGGCG GGTTCGTCGA CTACTCGTTC TGGTCCTTGC GGGAGCAGAC GATCCGCACG
AACCTGGGCC ATGTCCAGAT CTACAAGAAG GGCTACCTGG CCAGCGGCGA GGCAACGCCG
CTGAAATACG GGATCGCTGA CTACGAAGGG ATCCGCCGGA TGTTGGTGGA GGACCCGATT
CTGCAACCCC TGATCAAGAC CGTCACCGGC CAGCTCGCGT TCTCCGGGAT AGTCTCGAAC
TACGACAGTG GCGTTTCCAC CTTCTACACG GCCGTGGGAA TCGAGCCAGA AAGCTCCTTG
CTGCTGGGCT CACTGGATCG TATCGTCTTG GGCAGCGACC TGTCCCGCGT CGACGACACG
GGAGCGACGA TCGGCGCTGG TTTGGCACGC GGGCTTGCCG TCAGCTACGA CAGCCAGATC
GACATGCTCG CCATCAACCC TGCGGGCGGC CAGAACGCGA TGTCTGCCCA TGTGCGTGGC
GTCATGGAGT CGGGCATCAA GGACTACGAC GACCGGGTTC TGAAAATGCC GCTCAAGACG
GCCCAAACCC TACTGGAAAC CAAAGAGGTG AGCAAGATCA TTGTCCTGCT GAACGAGACC
GACCGGACGG CGCAGGCGCA GGCGCGGATC GAGCGGGTGA TCGAGGAGCG GGGGTTGCAG
CTCGAGACGA GGCCGTGGAG CTCGCTCGCG GTCTTCTATG ACCAGGTGGT CAACCTGTTC
AATGGAATCT TCTTCTTCAT CAAAACCATC GTCAGCACGA TCGTGGTCTT CATGATCAGC
AACACTATGA TGATGAACGT CCTGGAGCGG ACGCGGGAAA TTGGCACGCT GCGGGCCATC
GGGCTGACGG AGCGGGAGGT GTCCCGCCTT TTCCTGCTGG AGGGCGTGAT CATGGGCTTC
GTCGGAGCCG TCCTCAGCAT TGCCGTGGGC ATCGCACTGG CGGAGCTCAT CAACATCAAC
GGCGTGCCTA TGCCGCCTTC GCCGGGCTAC TCGCGCGGTT ACCTCGCCTT CATTCGCTGG
ACCGACGACT GGTCGCTGTT CTGGTTCAGC TCTGTCCTGG CCATCGTCAC TGCCTTCGCG
GCGTCGATCC TTCCCGCGCG AAGGGCCTCC AAGTTGGTGA TCGCGCAAGC CTTTCGCCAC
AGCTAA
 
Protein sequence
MNHLLAWLAN LIAVYALILI GWTIVRRPTD LAYAFSNLFR QKRRSLVTLS SIVLGGVAIF 
LFGGFVDYSF WSLREQTIRT NLGHVQIYKK GYLASGEATP LKYGIADYEG IRRMLVEDPI
LQPLIKTVTG QLAFSGIVSN YDSGVSTFYT AVGIEPESSL LLGSLDRIVL GSDLSRVDDT
GATIGAGLAR GLAVSYDSQI DMLAINPAGG QNAMSAHVRG VMESGIKDYD DRVLKMPLKT
AQTLLETKEV SKIIVLLNET DRTAQAQARI ERVIEERGLQ LETRPWSSLA VFYDQVVNLF
NGIFFFIKTI VSTIVVFMIS NTMMMNVLER TREIGTLRAI GLTEREVSRL FLLEGVIMGF
VGAVLSIAVG IALAELININ GVPMPPSPGY SRGYLAFIRW TDDWSLFWFS SVLAIVTAFA
ASILPARRAS KLVIAQAFRH S